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scnpilot_p_inoc_scaffold_747

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_747_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..545
DNA (543bp) protein (181aa)
methionine ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031362E3
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
metQ; D-methionine ABC transporter protein, periplasmic binding protein
scnpilot_p_inoc_scaffold_747_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

760..1950
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4E1_SORCE
hypothetical protein
GTPase Era {ECO:0000256|SAAS:SAAS00085723}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum S
scnpilot_p_inoc_scaffold_747_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1947..3365
DNA (1419bp) protein (473aa)
GTPase Der n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC01_SORC5 rbh
GTP-binding protein
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|SAAS:SAAS00038180}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobact
scnpilot_p_inoc_scaffold_747_4
unknown

Not on your lists

comp(3515..6676)
DNA (3162bp) protein (1054aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_747_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6673..7830)
DNA (1158bp) protein (386aa)
Probable anion transporter ATPase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC02_SORC5 rbh
anion transporter ATPase
Probable anion transporter ATPase {ECO:0000313|EMBL:CAN96117.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="So
scnpilot_p_inoc_scaffold_747_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8060..9640)
DNA (1581bp) protein (527aa)
DNA helicase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQ92_SORCE rbh
DNA helicase
DNA helicase {ECO:0000313|EMBL:AGP32793.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum S
scnpilot_p_inoc_scaffold_747_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9883..10338)
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFP8_MYXSD
LSU ribosomal protein L9p {ECO:0000313|EMBL:AKF08135.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sanda
50S ribosomal protein L9
scnpilot_p_inoc_scaffold_747_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10350..10637)
DNA (288bp) protein (96aa)
30S ribosomal protein S18 n=2 Tax=Sorangium cellulosum RepID=RS18_SORC5
rpsR; hypothetical protein
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
scnpilot_p_inoc_scaffold_747_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10695..11273)
DNA (579bp) protein (193aa)
30S ribosomal protein S6 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXK3_SORC5
rpsF; hypothetical protein
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiacea
scnpilot_p_inoc_scaffold_747_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11508..12092)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y798_SORCE
peptidyl-tRNA hydrolase
scnpilot_p_inoc_scaffold_747_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12147..12824)
DNA (678bp) protein (226aa)
50S ribosomal protein L25 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL25_SORC5
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1192034 s
rplY; 50S ribosomal protein L25/general stress protein Ctc
scnpilot_p_inoc_scaffold_747_12
unknown

Not on your lists

13007..13711
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_747_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13840..14784)
DNA (945bp) protein (315aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJV4_SORCE rbh
scnpilot_p_inoc_scaffold_747_14
Eimeria maxima, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(15093..16850)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Eimeria maxima RepID=U6M0Z3_EIMMA
Uncharacterized protein {ECO:0000313|EMBL:CDJ56763.1}; TaxID=5804 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria
hypothetical protein
scnpilot_p_inoc_scaffold_747_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17264..18475
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK30_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33507.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_747_16

Not on your lists

18673..19629
DNA (957bp) protein (319aa)
alpha/beta hydrolase fold id=109249 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EKD42081.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_747_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19658..20275)
DNA (618bp) protein (206aa)
Methyltransferase type 12 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JB27_ANAD2
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACL63838.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
scnpilot_p_inoc_scaffold_747_18
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20272..21501)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKE2_ANASK rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
hypothetical protein
scnpilot_p_inoc_scaffold_747_19
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21512..22270)
DNA (759bp) protein (253aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteri
Putative macrolide efflux ABC transporter ATP-binding protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUU3_CORCM rbh
macB9; putative macrolide efflux ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_747_20
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22283..23665)
DNA (1383bp) protein (461aa)
Secretion protein HlyD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDT3_ANADE rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
secretion protein HlyD
scnpilot_p_inoc_scaffold_747_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23783..25279
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FM70_SORC5 rbh
Putative membrane protein {ECO:0000313|EMBL:EYF03628.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondr
hypothetical protein
scnpilot_p_inoc_scaffold_747_22
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25430..26383
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG30_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62176.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
scnpilot_p_inoc_scaffold_747_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26841..28085
DNA (1245bp) protein (415aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94941.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94941.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FF01_SORC5 rbh
scnpilot_p_inoc_scaffold_747_24
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28273..30168
DNA (1896bp) protein (632aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNU1_SORC5
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF03933.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
scnpilot_p_inoc_scaffold_747_25
unknown

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comp(30289..31044)
DNA (756bp) protein (252aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_747_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31145..32503
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC18_SORCE
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF08702.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_747_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32562..33902)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1A1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38514.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_747_28
unknown

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comp(34003..34368)
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_747_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34391..35398)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWU4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36370.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_747_30
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(35373..36719)
DNA (1347bp) protein (449aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LI76_HALO1
sigma-54 dependent trancsriptional regulator Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
Fis family transcriptional regulator
Displaying items 1-30 of 37 in total

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