ggKbase home page

scnpilot_p_inoc_scaffold_812

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_812_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..851
DNA (849bp) protein (283aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C7H2_SPHS2
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADZ80593.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;"
scnpilot_p_inoc_scaffold_812_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(876..1829)
DNA (954bp) protein (318aa)
LysR family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XL59_SORCE
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AGP32500.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_812_3
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1933..3171
DNA (1239bp) protein (413aa)
Membrane fusion component of tripartite multidrug resistance system n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MK64_CORCM rbh
emrA; membrane fusion component of tripartite multidrug resistance system
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:AFE08650.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
scnpilot_p_inoc_scaffold_812_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3227..4777
DNA (1551bp) protein (517aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U290_MYXSD rbh
EmrB/QacA family drug resistance transporter
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:AGC42333.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococ
scnpilot_p_inoc_scaffold_812_5
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(4872..5336)
DNA (465bp) protein (155aa)
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
hypothetical protein id=12554354 bin=CNBR_ACIDO species=Leptospira sp. B5-022 genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
scnpilot_p_inoc_scaffold_812_6
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5976..6848
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G636_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM78638.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
hypothetical protein
scnpilot_p_inoc_scaffold_812_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6913..8370
DNA (1458bp) protein (486aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94675.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94675.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8N6_SORC5
scnpilot_p_inoc_scaffold_812_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8345..9421
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNX3_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF05609.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_812_9
unknown

Not on your lists

9370..10530
DNA (1161bp) protein (387aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_812_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10636..15564)
DNA (4929bp) protein (1643aa)
Putative lipoprotein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1B2_MYXXD
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABF92508.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
scnpilot_p_inoc_scaffold_812_11
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15767..17527)
DNA (1761bp) protein (587aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1B3_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF89877.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
scnpilot_p_inoc_scaffold_812_12
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17832..18626
DNA (795bp) protein (265aa)
Phospholipase/Carboxylesterase n=1 Tax=Burkholderia sp. H160 RepID=B5WQY0_9BURK
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EDZ99229.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
phospholipase/carboxylesterase
scnpilot_p_inoc_scaffold_812_13
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18646..18909
DNA (264bp) protein (88aa)
RSp0893; 4-oxalocrotonate tautomerase (EC:5.3.2.-)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralsto
Probable tautomerase RSp0893 n=3 Tax=Ralstonia solanacearum RepID=Y4393_RALSO
scnpilot_p_inoc_scaffold_812_14
unknown

Not on your lists

18920..19339
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_812_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19452..20006
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FVQ9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92302.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_812_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20187..21956)
DNA (1770bp) protein (590aa)
Bacterial Ig-like domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXB9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_812_17
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21953..23365)
DNA (1413bp) protein (471aa)
RCC1 repeat-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CC08_MYXFH
RCC1 repeat-containing protein
RCC1 repeat-containing protein {ECO:0000313|EMBL:AEI67165.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
scnpilot_p_inoc_scaffold_812_18
unknown

Not on your lists

comp(23340..24791)
DNA (1452bp) protein (484aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_812_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24788..26011)
DNA (1224bp) protein (408aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
glucosyltransferase-I precursor
Glucosyltransferase-I {ECO:0000313|EMBL:BAP55275.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_p_inoc_scaffold_812_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26008..27195)
DNA (1188bp) protein (396aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RED5_PHYPA
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_812_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27192..27998)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBW9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF05678.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_p_inoc_scaffold_812_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27995..28606)
DNA (612bp) protein (204aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYE7_SORC5
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF02714.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source=
ECF family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_812_23
Leishmania major, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

28964..30025
DNA (1062bp) protein (354aa)
Proteophosphoglycan 5 {ECO:0000313|EMBL:CBZ12682.1}; TaxID=5664 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania major.;"
scnpilot_p_inoc_scaffold_812_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30408..32171)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_812_25
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(32168..33547)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4U2_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN03863.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
scnpilot_p_inoc_scaffold_812_26
unknown

Not on your lists

comp(33522..34961)
DNA (1440bp) protein (480aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_812_27
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34958..36166)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_1807 RepID=L7VWR9_9BACT
glucosyltransferase-I precursor
Glucosyltransferase-I {ECO:0000313|EMBL:BAP55275.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_p_inoc_scaffold_812_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36163..37395)
DNA (1233bp) protein (411aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2I9_PHYPA
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_812_29
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37392..38204)
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF04631.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
scnpilot_p_inoc_scaffold_812_30
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38210..38770)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YHI7_SORCE
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AKF04632.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy