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scnpilot_p_inoc_scaffold_845

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_845_1
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1286)
DNA (1284bp) protein (428aa)
multidrug transporter MatE n=1 Tax=Spirosoma spitsbergense RepID=UPI0003642081
MATE efflux family protein Tax=CG_Delta_07
MATE efflux family protein
scnpilot_p_inoc_scaffold_845_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1484..2545
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPR3_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34416.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_845_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2547..4835
DNA (2289bp) protein (763aa)
Putative ferredoxin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F073_SORC5 rbh
napG; ferredoxin
Putative ferredoxin {ECO:0000313|EMBL:CAN91243.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
scnpilot_p_inoc_scaffold_845_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5029..5352
DNA (324bp) protein (108aa)
Fis family sigma-54 specific transcriptional regulator id=12556884 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Formate hydrogenlyase transcriptional activator {ECO:0000313|EMBL:AKF05649.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandara
sigma-54 factor interaction domain-containing protein
scnpilot_p_inoc_scaffold_845_5
unknown

Not on your lists

5455..6219
DNA (765bp) protein (255aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_845_6
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6230..7159)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI32_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM74460.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
scnpilot_p_inoc_scaffold_845_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7159..9846)
DNA (2688bp) protein (896aa)
TonB family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHF4_CORCM
TonB family protein / TonB-dependent receptor {ECO:0000313|EMBL:AKF05638.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaraci
TonB family protein
scnpilot_p_inoc_scaffold_845_8
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9858..10769)
DNA (912bp) protein (304aa)
lipoprotein Tax=RBG_16_Actinobacteria_67_15_curated
scnpilot_p_inoc_scaffold_845_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10769..12241)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI36_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF02619.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
phosphate-selective porin o and p family protein
scnpilot_p_inoc_scaffold_845_10
unknown

Not on your lists

comp(12281..12607)
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_845_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..13872)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI38_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF02621.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_845_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14113..16227
DNA (2115bp) protein (705aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacter
katE; catalase HPII (EC:1.11.1.6)
Catalase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TQ6_STIAD rbh
scnpilot_p_inoc_scaffold_845_13
unknown

Not on your lists

16296..16472
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_845_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16570..17595
DNA (1026bp) protein (342aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000255|HAMAP-Rule:MF_00218}; Short=UPD {ECO:0000255|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000255|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000255|HAMAP-Rule:MF_0
Uroporphyrinogen decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=DCUP_SORC5 rbh
scnpilot_p_inoc_scaffold_845_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17595..18593
DNA (999bp) protein (333aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP09_SORCE
hypothetical protein
scnpilot_p_inoc_scaffold_845_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18590..20008
DNA (1419bp) protein (473aa)
Protoporphyrinogen IX oxidase, aerobic, HemY {ECO:0000313|EMBL:EYF02341.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyce
Protoporphyrinogen IX and coproporphyrinogen III oxidase id=2521457 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protoporphyrinogen oxidase
scnpilot_p_inoc_scaffold_845_17
unknown

Not on your lists

comp(20050..20469)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_845_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20473..22209)
DNA (1737bp) protein (579aa)
Methylmalonyl-CoA mutase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7E2_SORCE rbh
methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AGP40789.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
scnpilot_p_inoc_scaffold_845_19

Not on your lists

comp(22757..23422)
DNA (666bp) protein (222aa)
DedA protein n=1 Tax=uncultured bacterium A1Q1_fos_962 RepID=L7VST4_9BACT
DedA protein {ECO:0000313|EMBL:AGC72172.1}; TaxID=1256592 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_962.;"
hypothetical protein
scnpilot_p_inoc_scaffold_845_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23777..24652)
DNA (876bp) protein (292aa)
pp2c11; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GGK4_SORC5 rbh
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:EYF01828.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiinea
scnpilot_p_inoc_scaffold_845_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24780..25337)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RRF_SORC5
rrf; hypothetical protein
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=448385 species="Bacteria;
scnpilot_p_inoc_scaffold_845_22
unknown

Not on your lists

25635..27308
DNA (1674bp) protein (558aa)
hypothetical protein
scnpilot_p_inoc_scaffold_845_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27472..28854)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5N2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_845_24
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29352..30170)
DNA (819bp) protein (273aa)
ABC-3 protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU95_TRURR
Zinc ABC transporter, inner membrane permease protein ZnuB {ECO:0000313|EMBL:AKF05480.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinace
ABC-3 protein
scnpilot_p_inoc_scaffold_845_25
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30230..32206
DNA (1977bp) protein (659aa)
PREDICTED: keratin-associated protein 9-1-like n=1 Tax=Cricetulus griseus RepID=UPI00022F684E
Putative keratin associated protein {ECO:0000313|EMBL:EPX60041.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;
hypothetical protein
scnpilot_p_inoc_scaffold_845_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32244..33371
DNA (1128bp) protein (376aa)
oxidoreductase (EC:1.1.-.-)
Putative oxidoreductase {ECO:0000313|EMBL:CAN91009.1}; EC=1.1.-.- {ECO:0000313|EMBL:CAN91009.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polya
Putative oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETH6_SORC5 rbh
scnpilot_p_inoc_scaffold_845_27
unknown

Not on your lists

comp(33508..34095)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_845_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34241..35446
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y405_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39191.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_845_29
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35535..36659)
DNA (1125bp) protein (375aa)
DNA alkylation repair enzyme n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RZ36_9DELT rbh
DNA alkylation repair enzyme {ECO:0000313|EMBL:KFE68719.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_845_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36824..38911)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRE1_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35757.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
Displaying items 1-30 of 52 in total

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