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scnpilot_p_inoc_scaffold_848

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_848_1
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..862
DNA (861bp) protein (287aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016};; Membrane-bound lytic murein transglycos
murein transglycosylase n=1 Tax=Aeromonas caviae RepID=UPI0002197D3E rbh
putative transglycosylase
scnpilot_p_inoc_scaffold_848_2
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(937..2301)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003767F47
Uncharacterized protein {ECO:0000313|EMBL:KFZ39379.1}; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2
hypothetical protein
scnpilot_p_inoc_scaffold_848_3
unknown

Not on your lists

comp(2548..3264)
DNA (717bp) protein (239aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_848_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..5196)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSF2_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01619.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_848_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5248..6417)
DNA (1170bp) protein (390aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXL8_SORC5
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF10280.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
scnpilot_p_inoc_scaffold_848_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6774..8567)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_848_7
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8564..9988)
DNA (1425bp) protein (475aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23605.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae;
scnpilot_p_inoc_scaffold_848_8
unknown

Not on your lists

comp(9933..11228)
DNA (1296bp) protein (432aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_848_9
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11225..12391)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6A3_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC41974.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
scnpilot_p_inoc_scaffold_848_10
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12496..13686)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMQ9_SORCE
regulator of chromosome condensation RCC1 Tax=CG_Delta_07
hypothetical protein
scnpilot_p_inoc_scaffold_848_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13683..14417)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ00_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96827.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_848_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14414..14950)
DNA (537bp) protein (179aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN96828.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_848_13
unknown

Not on your lists

comp(15080..16096)
DNA (1017bp) protein (339aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_848_14
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16207..17352)
DNA (1146bp) protein (382aa)
Uncharacterized protein (Fragment) n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I4S8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN15226.1}; Flags: Fragment;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
translation initiation factor 2 (bIF-2)
scnpilot_p_inoc_scaffold_848_15
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(17536..17961)
DNA (426bp) protein (142aa)
Galectin-4 n=1 Tax=Crassostrea gigas RepID=K1QGJ6_CRAGI
Galectin-4 {ECO:0000313|EMBL:EKC20706.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostr
hypothetical protein
scnpilot_p_inoc_scaffold_848_16
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18130..19017)
DNA (888bp) protein (296aa)
Putative lipoprotein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7K9_9DELT
Putative lipoprotein {ECO:0000313|EMBL:EDM78087.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocys
poly(3-hydroxybutyrate) depolymerase
scnpilot_p_inoc_scaffold_848_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19228..19704)
DNA (477bp) protein (159aa)
Lipoprotein MlpB n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UG40_MYXSD
lipoprotein MlpB
Lipoprotein MlpB {ECO:0000313|EMBL:AGC46542.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus st
scnpilot_p_inoc_scaffold_848_18
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19789..20010)
DNA (222bp) protein (74aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Areni
Putative uncharacterized protein yhhW n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MH71_BDEBA
yhhW; hypothetical protein
scnpilot_p_inoc_scaffold_848_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20313..23288
DNA (2976bp) protein (992aa)
Acyl-CoA synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GE99_9DELT rbh
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:AKF07496.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" sourc
Very long-chain acyl-CoA synthetase
scnpilot_p_inoc_scaffold_848_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23443..25143
DNA (1701bp) protein (567aa)
maeB1; malate dehydrogenase (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) {ECO:0000313|EMBL:CAN95766.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CAN95766.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobact
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I5_SORC5 rbh
scnpilot_p_inoc_scaffold_848_21
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(25203..25673)
DNA (471bp) protein (157aa)
Uncharacterized protein id=3138130 bin=GWC1_Spirochaetes_27_15 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein Tax=GWD1_Spirochaetes_27_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_848_22
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26124..27716)
DNA (1593bp) protein (531aa)
Collagen triple helix repeat-containing protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBC3_9CLOT
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:EGD48327.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clo
hypothetical protein
scnpilot_p_inoc_scaffold_848_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27771..28793)
DNA (1023bp) protein (341aa)
SCP family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHP6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF01936.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_848_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29038..30381
DNA (1344bp) protein (448aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF04793.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
Related to glycerol-3-phosphate transporter id=4800209 bin=GWC2_OD1_43_27 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
glycerol-3-phosphate transporter
scnpilot_p_inoc_scaffold_848_25
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

30518..31675
DNA (1158bp) protein (386aa)
NADPH dehydrogenase (EC:1.6.99.1)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQL0_9BACT rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EEF57860.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera
scnpilot_p_inoc_scaffold_848_26
unknown

Not on your lists

comp(31771..31956)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_848_27
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31989..32696)
DNA (708bp) protein (236aa)
HAD family hydrolase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KDV3_9GAMM rbh
HAD family hydrolase {ECO:0000313|EMBL:EPC00367.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensi
haloacid dehalogenase
scnpilot_p_inoc_scaffold_848_28
unknown

Not on your lists

33634..34788
DNA (1155bp) protein (385aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_848_29
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(34931..37492)
DNA (2562bp) protein (854aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7014F rbh
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
scnpilot_p_inoc_scaffold_848_30
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37666..39045
DNA (1380bp) protein (460aa)
UPI0003CE13C6 related cluster n=1 Tax=unknown RepID=UPI0003CE13C6
Uncharacterized protein {ECO:0000313|EMBL:ESW63532.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
serine/threonine protein kinase
Displaying items 1-30 of 42 in total

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