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scnpilot_p_inoc_scaffold_889

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_889_1
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)
Uv inducible DNA polymerase umuc / mucb, putative n=1 Tax=Ricinus communis RepID=B9TCM1_RICCO
DNA polymerase V subunit UmuC {ECO:0000313|EMBL:AKH38332.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomona
UMUC domain-containing protein DNA-repair protein
scnpilot_p_inoc_scaffold_889_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195..653)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003618C53
Variovorax paradoxus strain MEDvA23 contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37523.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
hypothetical protein
scnpilot_p_inoc_scaffold_889_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

998..7483
DNA (6486bp) protein (2162aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ27_HALO1
TPR domain protein, putative component of TonB system {ECO:0000313|EMBL:AKF07054.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; S
hypothetical protein
scnpilot_p_inoc_scaffold_889_4
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7492..8184
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQU5_DESBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU89174.1}; Flags: Precursor;; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium
scnpilot_p_inoc_scaffold_889_5
unknown

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8372..9196
DNA (825bp) protein (275aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_889_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9356..9748)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGI5_9DELT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EPX62161.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
dfrA1; putative endoribonuclease L-PSP
scnpilot_p_inoc_scaffold_889_7
unknown

Not on your lists

comp(9798..10268)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_889_8
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10349..10651
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H4C0_PSEAC
protein of unknown function (DUF326)
Uncharacterized protein {ECO:0000313|EMBL:AFY96884.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
scnpilot_p_inoc_scaffold_889_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10668..11279)
DNA (612bp) protein (204aa)
Recombination protein RecR n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLS8_SORCE
hypothetical protein
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangia
scnpilot_p_inoc_scaffold_889_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11320..11643)
DNA (324bp) protein (108aa)
Nucleoid-associated protein sce0258 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQB1_SORC5
hypothetical protein
Nucleoid-associated protein sce0258 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sour
scnpilot_p_inoc_scaffold_889_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11656..13650)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XS55_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33423.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_889_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13771..14652)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8U1_SORC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96038.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_889_13
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14771..15397)
DNA (627bp) protein (209aa)
Isochorismatase hydrolase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3GBC9_ENTLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI32162.1}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sal
scnpilot_p_inoc_scaffold_889_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15516..16445)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTD2_SORC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98517.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_889_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16595..17515)
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTD5_SORC5 rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAN98518.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_889_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17665..18627)
DNA (963bp) protein (321aa)
Electron transfer flavoprotein alpha-subunit n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVN3_SORC5 rbh
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:CAN90782.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;"
scnpilot_p_inoc_scaffold_889_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18650..19471)
DNA (822bp) protein (274aa)
Putative electron transfer flavoprotein beta-subunit n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVN6_SORC5 rbh
electron transfer flavoprotein subunit beta
Putative electron transfer flavoprotein beta-subunit {ECO:0000313|EMBL:CAN90783.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sora
scnpilot_p_inoc_scaffold_889_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19936..21630
DNA (1695bp) protein (565aa)
nadB; l-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FPH7_STIAD rbh
L-aspartate oxidase {ECO:0000313|EMBL:AKF11379.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinu
scnpilot_p_inoc_scaffold_889_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21633..22460
DNA (828bp) protein (276aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EMX9_SORC5
Putative membrane associated protease {ECO:0000313|EMBL:EYF03909.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_889_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22693..23595
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037C348C
Uncharacterized protein {ECO:0000313|EMBL:EYF06191.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
protein of unknown function DUF4142
scnpilot_p_inoc_scaffold_889_21
unknown

Not on your lists

comp(23620..25482)
DNA (1863bp) protein (621aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_889_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25966..27087
DNA (1122bp) protein (374aa)
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW51_SORCE
3-methyl-2-oxobutanoate dehydrogenase
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit {ECO:0000313|EMBL:EYF08320.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiinea
scnpilot_p_inoc_scaffold_889_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27093..28085
DNA (993bp) protein (331aa)
Pyruvate dehydrogenase subunit beta n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK67_SORCE rbh
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit {ECO:0000313|EMBL:EYF08319.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae
pyruvate dehydrogenase subunit beta
scnpilot_p_inoc_scaffold_889_24
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28107..29477
DNA (1371bp) protein (457aa)
pdhC; dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FD47_SORC5 rbh
Dihydrolipoamide acyltransferase {ECO:0000313|EMBL:AKF03732.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source
scnpilot_p_inoc_scaffold_889_25
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29563..29946)
DNA (384bp) protein (128aa)
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
scnpilot_p_inoc_scaffold_889_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29955..30329)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF00671.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
scnpilot_p_inoc_scaffold_889_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30350..31426
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFT0_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF02420.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_889_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31488..33110
DNA (1623bp) protein (541aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNU1_SORC5 rbh
Putative serine/threonine protein kinase {ECO:0000313|EMBL:EYF02419.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;"
scnpilot_p_inoc_scaffold_889_29
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33128..35128
DNA (2001bp) protein (667aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05588.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
scnpilot_p_inoc_scaffold_889_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35374..36195
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000374D1A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37206.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
Displaying 30 items

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