ggKbase home page

scnpilot_p_inoc_scaffold_925

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_925_1
unknown

Not on your lists

2..388
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_925_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

425..1516
DNA (1092bp) protein (364aa)
Response regulator/GGDEF domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEF7_SORC5 rbh
GGDEF/response regulator receiver domain protein {ECO:0000313|EMBL:EYF04351.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondro
response regulator/GGDEF domain-containing protein
scnpilot_p_inoc_scaffold_925_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1683..3152
DNA (1470bp) protein (490aa)
Outer membrane efflux protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEG2_SORC5 rbh
Outer membrane efflux protein, putative {ECO:0000313|EMBL:EYF04349.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_925_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..4601)
DNA (1422bp) protein (474aa)
Probable outer membrane efflux lipoprotein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSH7_SORC5 rbh
outer membrane efflux lipoprotein
Probable outer membrane efflux lipoprotein {ECO:0000313|EMBL:CAN93779.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" s
scnpilot_p_inoc_scaffold_925_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..6004)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSG8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01625.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_925_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6129..7115)
DNA (987bp) protein (329aa)
No similarity n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G256_SORC5
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
scnpilot_p_inoc_scaffold_925_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7231..9054)
DNA (1824bp) protein (608aa)
Hsp70 heat shock protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G252_SORC5 rbh
Hsp70 heat shock protein
Hsp70 heat shock protein {ECO:0000313|EMBL:CAN92579.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_925_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9300..10757)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR24_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02045.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_925_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10801..11715)
DNA (915bp) protein (305aa)
Bacterial lipid A biosynthesis acyltransferase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNY8_STIAD
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KFA89555.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.
bacterial lipid a biosynthesis acyltransferase
scnpilot_p_inoc_scaffold_925_10
unknown

Not on your lists

comp(11771..12340)
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_925_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12337..12942)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTF9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35646.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_925_12
unknown

Not on your lists

comp(12939..13658)
DNA (720bp) protein (240aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_925_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13651..14313)
DNA (663bp) protein (221aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G239_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN92575.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_925_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14593..15984
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FV19_SORC5 rbh
Protease, insulinase family/protease, insulinase family {ECO:0000313|EMBL:EYF03126.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
hypothetical protein rbh
scnpilot_p_inoc_scaffold_925_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15981..17522
DNA (1542bp) protein (514aa)
Putative zinc protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FV23_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF03125.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
zinc protease
scnpilot_p_inoc_scaffold_925_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17519..18013
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9H7_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF06169.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_p_inoc_scaffold_925_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18255..18533
DNA (279bp) protein (93aa)
30S ribosomal protein S16 n=2 Tax=Sorangium cellulosum RepID=RS16_SORC5
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Soran
scnpilot_p_inoc_scaffold_925_18
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18600..18836
DNA (237bp) protein (79aa)
UPF0109 protein SYNAS_21250 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV95_SYNAS
RNA-binding protein
UPF0109 protein SYN_00708 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus ac
scnpilot_p_inoc_scaffold_925_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19017..19652
DNA (636bp) protein (212aa)
Ribosome maturation factor RimM n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX90_SORCE
ribosome maturation factor RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Poly
scnpilot_p_inoc_scaffold_925_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19655..20386
DNA (732bp) protein (244aa)
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltr
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=TRMD_SORC5 rbh
scnpilot_p_inoc_scaffold_925_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20383..20934
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F3M9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94598.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_925_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21060..21833)
DNA (774bp) protein (258aa)
Methyltransferase small n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7VDR3_DESML
methyltransferase small Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
putative methyltransferase small
scnpilot_p_inoc_scaffold_925_23
unknown

Not on your lists

comp(22062..23168)
DNA (1107bp) protein (369aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_925_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23335..24399
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZB2_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37824.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_925_25
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24490..25806
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0003074B92
TPR repeat protein {ECO:0000313|EMBL:AKF09171.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus
hypothetical protein
scnpilot_p_inoc_scaffold_925_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25857..26912
DNA (1056bp) protein (352aa)
GTPase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXV2_SORCE rbh
GTPase
GTPase {ECO:0000313|EMBL:AGP37191.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-
scnpilot_p_inoc_scaffold_925_27
unknown

Not on your lists

comp(26896..27402)
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_925_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27484..28401)
DNA (918bp) protein (306aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1254432 species=
Endonuclease III n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPE7_SORCE rbh
endonuclease III
scnpilot_p_inoc_scaffold_925_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28460..30148)
DNA (1689bp) protein (563aa)
Protein kinase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCZ8_SORCE rbh
protein kinase
Protein kinase {ECO:0000313|EMBL:AGP42236.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum
scnpilot_p_inoc_scaffold_925_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30268..32946)
DNA (2679bp) protein (893aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae
DNA gyrase subunit A n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWZ2_SORCE rbh
DNA gyrase subunit A
Displaying items 1-30 of 33 in total

View Taxonomy