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scnpilot_p_inoc_scaffold_1565

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1565_1
unknown

Not on your lists

3..320
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1565_2
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(354..1109)
DNA (756bp) protein (252aa)
Kazal domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBY3_9DELT
hypothetical protein Tax=CG_Delta_07
hypothetical protein
scnpilot_p_inoc_scaffold_1565_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1179..1856)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSN1_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF03270.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_p_inoc_scaffold_1565_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1853..2560)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUJ7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36006.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1565_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2728..4278
DNA (1551bp) protein (517aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EMX1_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF79511.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
scnpilot_p_inoc_scaffold_1565_6
unknown

Not on your lists

comp(4334..4987)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1565_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5309..6214
DNA (906bp) protein (302aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycine--tRNA ligase alpha subunit n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM45_SORCE rbh
glycyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1565_8
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6284..6973)
DNA (690bp) protein (230aa)
GPR1/FUN34/yaaH family protein id=2224305 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
GPR1/FUN34/yaaH family protein Tax=GWB2_Elusimicrobia_63_22_curated
scnpilot_p_inoc_scaffold_1565_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7226..7651)
DNA (426bp) protein (142aa)
Peroxiredoxin osmC n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSV9_CORCM
osmC; peroxiredoxin osmC
Peroxiredoxin osmC {ECO:0000313|EMBL:AFE09713.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Coralloc
scnpilot_p_inoc_scaffold_1565_10
unknown

Not on your lists

comp(8112..8906)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036F2EF8
scnpilot_p_inoc_scaffold_1565_11
unknown

Not on your lists

9161..10390
DNA (1230bp) protein (410aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1565_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10544..11026
DNA (483bp) protein (161aa)
Two-component response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF78_SORC5
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CAN93113.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sor
scnpilot_p_inoc_scaffold_1565_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11180..11959
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EYF06872.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_1565_14
unknown

Not on your lists

11969..12304
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1565_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12321..13739
DNA (1419bp) protein (473aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ENC4_SORC5 rbh
sigma-54 dependent transcriptional regulator
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CAN90843.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;"
scnpilot_p_inoc_scaffold_1565_16
unknown

Not on your lists

comp(13752..14084)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1565_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14081..14434)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7Q7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40285.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1565_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14671..15267
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXI2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97097.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_1565_19
unknown

Not on your lists

comp(15101..15682)
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1565_20
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15710..17104
DNA (1395bp) protein (465aa)
dsbD; thiol:disulfide interchange protein DsbD (EC:1.8.1.8)
Thiol:disulfide interchange protein DsbD n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXI4_SORC5 rbh
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase {ECO:0000313|EMBL:EYF06950.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae;
scnpilot_p_inoc_scaffold_1565_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17277..18278)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBV0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40288.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1565_22
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19308..19682)
DNA (375bp) protein (125aa)
Histidine kinase {ECO:0000313|EMBL:ABQ34568.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABQ34568.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrh
scnpilot_p_inoc_scaffold_1565_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19843..20910)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTB4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96925.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_1565_24
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21095..21616)
DNA (522bp) protein (174aa)
GreA/GreB family elongation factor Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
Putative uncharacterized protein id=3335691 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
scnpilot_p_inoc_scaffold_1565_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21969..23618)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0L9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39027.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1565_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23813..25057
DNA (1245bp) protein (415aa)
endo-1,4-beta-glucanase (EC:3.2.1.4)
Endoglucanase E n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGX0_9DELT
Endoglucanase E {ECO:0000313|EMBL:EPX61627.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
scnpilot_p_inoc_scaffold_1565_27
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25165..27294
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JLC6_PSEST
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1565_28
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(27313..28932)
DNA (1620bp) protein (540aa)
arsA; arylsulfatase; K01130 arylsulfatase [EC:3.1.6.1] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Sulfatase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEH1_BEII9 rbh
sulfatase
Displaying 28 items

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