ggKbase home page

scnpilot_p_inoc_scaffold_1602

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1602_1
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2422
DNA (2421bp) protein (807aa)
histidine kinase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4C063 rbh
multi-sensor hybrid histidine kinase
Tax=BJP_IG2069_Desfulfarculales_53_13
scnpilot_p_inoc_scaffold_1602_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2482..3393)
DNA (912bp) protein (304aa)
Cell division protein FtsQ n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSP4_SORCE
hypothetical protein
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangia
scnpilot_p_inoc_scaffold_1602_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3444..4865)
DNA (1422bp) protein (474aa)
murC; UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XI31_SORCE rbh
scnpilot_p_inoc_scaffold_1602_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4865..6052)
DNA (1188bp) protein (396aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQW9_SORCE rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase
scnpilot_p_inoc_scaffold_1602_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..7375)
DNA (1320bp) protein (440aa)
Cell division protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI51_SORC5 rbh
Cell division protein FtsW {ECO:0000313|EMBL:EYF02387.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chond
ftsW; cell division protein
scnpilot_p_inoc_scaffold_1602_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7372..8700)
DNA (1329bp) protein (443aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI47_SORC5 rbh
scnpilot_p_inoc_scaffold_1602_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8704..9858)
DNA (1155bp) protein (385aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=MRAY_SORC5 rbh
scnpilot_p_inoc_scaffold_1602_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10064..10942
DNA (879bp) protein (293aa)
PKD domain containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ40_CELFA
Uncharacterized protein {ECO:0000313|EMBL:KIC59490.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
PKD domain-containing protein
scnpilot_p_inoc_scaffold_1602_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11023..12423)
DNA (1401bp) protein (467aa)
Amidase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P8T9_9DELT rbh
Amidase {ECO:0000313|EMBL:EPX59541.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus
amidase
scnpilot_p_inoc_scaffold_1602_10
unknown

Not on your lists

12548..14173
DNA (1626bp) protein (542aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1602_11
unknown

Not on your lists

14391..15635
DNA (1245bp) protein (415aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1602_12
unknown

Not on your lists

comp(15643..15741)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1602_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15853..17031)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DA99CC rbh
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_1602_14
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17336..17944
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003629F17
Uncharacterized protein {ECO:0000313|EMBL:EPX98595.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-0
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_1602_15
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17966..18457)
DNA (492bp) protein (164aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobact
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F659D2
coenzyme A transferase
Displaying 15 items

View Taxonomy