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scnpilot_p_inoc_scaffold_1760

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1760_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..472
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ20_HALO1
Uncharacterized protein {ECO:0000313|EMBL:AKF09961.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_p_inoc_scaffold_1760_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

691..1989
DNA (1299bp) protein (433aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIJ2_SORCE rbh
scnpilot_p_inoc_scaffold_1760_3
unknown

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comp(2062..2634)
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1760_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2743..3459)
DNA (717bp) protein (239aa)
Glycosyl transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSM3_SORCE
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGP33588.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cell
scnpilot_p_inoc_scaffold_1760_5
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3595..4302
DNA (708bp) protein (236aa)
DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLR1_SORC5 rbh
ArsR family transcriptional regulator Tax=RifOxyA12_full_Proteobacteria_58_15_curated
DNA-binding response regulator
scnpilot_p_inoc_scaffold_1760_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4310..5725
DNA (1416bp) protein (472aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RifOxyA12_full_Proteobacte
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZX6_SORCE rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1760_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5722..6816
DNA (1095bp) protein (365aa)
Phosphate-binding protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WV29_KYRT2 rbh
Phosphate-binding protein {ECO:0000256|PIRNR:PIRNR002756}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphate ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1760_8
R_NC10_66_22, NC10, Bacteria

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6821..7813
DNA (993bp) protein (331aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Phosphate ABC transporter membrane protein 1, PhoT family id=3269515 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
phosphate ABC transporter permease
scnpilot_p_inoc_scaffold_1760_9
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7810..8655
DNA (846bp) protein (282aa)
Phosphate transport system permease protein PstA n=1 Tax=uncultured bacterium F25-01 RepID=I3VIG0_9BACT
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66568.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
ABC phosphate transporter, inner membrane subunit
scnpilot_p_inoc_scaffold_1760_10
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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8660..9475
DNA (816bp) protein (272aa)
Phosphate ABC transporter, ATP-binding protein PstB n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF48_SORC5 rbh
phosphate ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
pstB; phosphate ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_1760_11
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9520..10350
DNA (831bp) protein (277aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF46_SORC5
phosphate transport system regulatory protein PhoU Tax=RifOxyA12_full_Proteobacteria_58_15_curated
phoU; phosphate transport system regulatory protein PhoU
scnpilot_p_inoc_scaffold_1760_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10420..11892)
DNA (1473bp) protein (491aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q660_9DELT rbh
scnpilot_p_inoc_scaffold_1760_13
unknown

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comp(11988..12182)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1760_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12326..13441
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFZ4_SORC5
HtrA family serine protease {ECO:0000313|EMBL:EYF06266.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chon
hypothetical protein
scnpilot_p_inoc_scaffold_1760_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13496..14266
DNA (771bp) protein (257aa)
Protein serine/threonine phosphatase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK68_SORCE rbh
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:EYF06267.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiinea
protein serine/threonine phosphatase
scnpilot_p_inoc_scaffold_1760_16
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14520..15662
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:EMF52734.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 2543
scnpilot_p_inoc_scaffold_1760_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15729..16292
DNA (564bp) protein (188aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN96828.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_p_inoc_scaffold_1760_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16293..16925
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHW3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AGP38453.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
tif2; translation initiation factor IF-2
Displaying 18 items

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