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scnpilot_p_inoc_scaffold_2639

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2639_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..236
DNA (234bp) protein (78aa)
30S ribosomal protein S4 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGC2_SORC5
rpsD2; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CAN98107.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
scnpilot_p_inoc_scaffold_2639_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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420..1445
DNA (1026bp) protein (342aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIC2_SORCE rbh
DNA-directed RNA polymerase subunit alpha
scnpilot_p_inoc_scaffold_2639_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1570..2076
DNA (507bp) protein (169aa)
50S ribosomal protein L17 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL17_SORC5
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
scnpilot_p_inoc_scaffold_2639_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2328..3770)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGB1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98104.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_2639_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3814..4092)
DNA (279bp) protein (93aa)
acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=2 Tax=Sorangium cellulosum RepID=ACYP_SORC5
Acylphosphate phosphohydrolase {ECO:0000313|EMBL:AKF10608.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="
scnpilot_p_inoc_scaffold_2639_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4337..5335
DNA (999bp) protein (333aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN93698.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN93698.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRY1_SORC5
scnpilot_p_inoc_scaffold_2639_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5352..5969
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKQ3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96623.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_2639_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5966..7831
DNA (1866bp) protein (622aa)
Heat-shock chaperone protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLU7_SORCE rbh
heat-shock chaperone protein
Heat-shock chaperone protein {ECO:0000313|EMBL:AGP32755.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
scnpilot_p_inoc_scaffold_2639_9
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7907..10219)
DNA (2313bp) protein (771aa)
Cytochrome P450 family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CRV4_BURPE
Cytochrome P450 {ECO:0000313|EMBL:EWH00489.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
thcB; cytochrome domain protein
scnpilot_p_inoc_scaffold_2639_10
unknown

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comp(10388..10702)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2639_11
unknown

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11231..11398
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2639_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11408..11800
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GU27_SORC5
Signal transduction response regulator / Disease resistance domain-containing protein {ECO:0000313|EMBL:AKF09075.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
hypothetical protein
scnpilot_p_inoc_scaffold_2639_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11816..11974
DNA (159bp) protein (53aa)
Putative serine/threonine-protein kinase pknH {ECO:0000313|EMBL:EYF01243.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyc
Displaying 13 items

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