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scnpilot_p_inoc_scaffold_259_3

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(4140..5342)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin secretion protein D n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489FE2 similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 367.0
  • Bit_score: 412
  • Evalue 5.60e-112
  • rbh
Hemolysin secretion protein D {ECO:0000313|EMBL:EZP66672.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 362.0
  • Bit_score: 408
  • Evalue 1.50e-110
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 321.0
  • Bit_score: 388
  • Evalue 3.20e-105

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
GTGCGGAGCAGAACGCTCGAAGGGAATTTCTTCATGGTCGAACTGCTCGAGACCCCCTCTCGCCAAGCCAACCAGCCTGCCGGTGTTGGACATCACGCTCGCCCATCGCAACCGAAGCGGAATGGGCGCTCCATCCTCGTCACCGCGCTCGTCGTCGCGGCGCTCGGGGCCGGGTTGTTCGTCCTGCGGGGACGTCGTCAGGCCCTGGCAGCGCCATACGAAGCGCCGCCGGTTGCCGTGGCCGCCACCGCGGTGAAGCCCACCGAAGTTCCCGTCGCCCTGGAGACGGTGGGCTCACTGCGCGCGGTTCGCGAAGTCGTGCTCGCACCGGAGCTGGCGGGGCGCATCGTGACGCTCCACTTCGAATCCGGTGCTCGGGTGCGGGCGGGCGATCGCCTCGTCCAGCTGTACGACGCTCCGGAGAGAGCCGATCGCGCCGCCGCCCAGGCGCGTGCGAGCCTGGCGCGGTCGGAGCTGGCCCGCTCCGTCACTCTGGCATCGACCGGAGTCGAGCCCAAACAGCTGCTGGAACGACGCCAGGCCGATGTGGACCAGGCCGCGGCAAGCATGCAGCAGCTCGACGCACGCATCGCGCAGAAGTCGATCCGTGCGCCGTTCGACGGCCAGCTCGGAGTGCGCCAGGTCAGCCTCGGCCAGTATCTCAATCCCGGCGACGCCATCGCCACGTTGGCCGACATCGACCAGCTGCTCGTCGACTTCAGCCTGCCCCAACAGGAGCTGGCCCAGGTGCGTGTCGGCGCCACGGTACGCATCACTACGGACGCCTTCCCCGAGCGCAGCTTCACGGCGAAGGTCAACGCCGTCGAGCCGCGGATCAATCCGGACACGCGCAATCTCCAGGCCCAGGCGGTGCTCGCCAACGGCGACGGTGCGCTGCGCCCGGGCATGCACGTGAACGTTGCCCTGGAGCTGCCGCCCGGACGCGAAGCGCTCGTCCTGCCGGCCACGGCTGTCCAATCGTCGTCCACCGGAGACAGCGTGGTGGTGGTGCGAGGCGACCAACCCGAACACGCCGGCACCGCCGAGGTCCTGTCCGTCACGATCGGTCGGCGCATCGGCGACCGAGTCGTCGTCGTGCAAGGACTCGAGCCTGGCGCCGTGGTGATCACCGAAGGGCAATTGCGTGTCCAACCCGGAATGCGCGTTCAGGTCACGCGCGGCGCCGATGCGGGGGCGCGCTGA
PROTEIN sequence
Length: 401
VRSRTLEGNFFMVELLETPSRQANQPAGVGHHARPSQPKRNGRSILVTALVVAALGAGLFVLRGRRQALAAPYEAPPVAVAATAVKPTEVPVALETVGSLRAVREVVLAPELAGRIVTLHFESGARVRAGDRLVQLYDAPERADRAAAQARASLARSELARSVTLASTGVEPKQLLERRQADVDQAAASMQQLDARIAQKSIRAPFDGQLGVRQVSLGQYLNPGDAIATLADIDQLLVDFSLPQQELAQVRVGATVRITTDAFPERSFTAKVNAVEPRINPDTRNLQAQAVLANGDGALRPGMHVNVALELPPGREALVLPATAVQSSSTGDSVVVVRGDQPEHAGTAEVLSVTIGRRIGDRVVVVQGLEPGAVVITEGQLRVQPGMRVQVTRGADAGAR*