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scnpilot_p_inoc_scaffold_259_4

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 5449..5991

Top 3 Functional Annotations

Value Algorithm Source
Redox-sensitive transcriptional activator SoxR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6M3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 140.0
  • Bit_score: 206
  • Evalue 2.80e-50
Redox-sensitive transcriptional activator SoxR {ECO:0000313|EMBL:EYR78989.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shine similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 140.0
  • Bit_score: 206
  • Evalue 3.90e-50
soxR; redox-sensitive transcriptional activator SoxR similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 203
  • Evalue 3.80e-50

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCGCAAGTCAGCCCAAAGGCCCCGCGCTAACCTCCGCGCCGATCCGGCATCCAGCGCCGGCGCTGAGGCAGTGGAAGCGATCTCGCTCGCCTCCCATCCGTCGGCGCAAGTGTTGAGCGTGGGCGAGGTCGCCCGGCGCAGCGGCGTCGCCGTGTCGACGCTTCATTTCTACGAAGCGCAGGGTCTGATCGACAGTCGCCGCACGGCAGGCAACCAGCGCCGCTACCCGCGGTCGACCCTGCGACTGATTGCGGTGATCAAGGTCGCGCAGCGGACGGGCATCCCCTTGGCCGACATTCGCGAGCGTCTGGCCAGCTTGCCCCGCAATCGACCGCTCAGCGCGTCCGACTGGAAGAAGCTGTCTGCCGGATGGCGCACGGAGCTGGATGACCGCATCGCGCGTTTGCAGCGACTGCGCGACCAGCTCAGCACCTGCATCGGCTGCGGCTGCCTCTCCCTCGAGGAATGTCCACTGCGCAATCCGGACGATGTGAAGTCGCAGGAGGGACCAGGTCCGCGGTTCCTCGATCCCGAAGACTGA
PROTEIN sequence
Length: 181
MRKSAQRPRANLRADPASSAGAEAVEAISLASHPSAQVLSVGEVARRSGVAVSTLHFYEAQGLIDSRRTAGNQRRYPRSTLRLIAVIKVAQRTGIPLADIRERLASLPRNRPLSASDWKKLSAGWRTELDDRIARLQRLRDQLSTCIGCGCLSLEECPLRNPDDVKSQEGPGPRFLDPED*