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scnpilot_p_inoc_scaffold_1216_12

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 13635..14954

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator, Fis family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB26_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 440.0
  • Bit_score: 230
  • Evalue 3.30e-57
Sigma-54 dependent transcriptional regulator, Fis family protein {ECO:0000313|EMBL:EDM76908.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nanno similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 440.0
  • Bit_score: 230
  • Evalue 4.70e-57
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 461.0
  • Bit_score: 221
  • Evalue 4.40e-55

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Taxonomy

Plesiocystis pacifica → Plesiocystis → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
GTGACGGAGGGCCGCGAGCTCGAGCCGAGGGCGCCTCGATGCCGTCCGCAGCTCACGTGGACGGACGCAGCAGGCACTCATGCGCTCGAGCTCGGCGAGGCGCGCACCGCCGGCTCGGCGGTGCACTGCGAGCTCGTCGTCGCGGACAAGGCCGTCTCTCGCCTCCACTTCGAGCTCGATCCGCAGACCGACGGCCTTTGGGTACGCGACCTCGGGAGCCGCAACGGCACCTACGTCAACGGCGTGAGGATCATGGAAGCGCGCGTCCCCGCGGGCTCGGTGATCCGCGTCGGGACGACGGACATGACGGTCTCGTTCGGCAACCCCGAGCCGATCGCCCCCGGTCCGCCGGCCGACGCCCCCGTCTCGTTCGGCGCGCTCGACGGATGGTCGGCATCGATGCGGGAGGTCTTCGCGACGCTCTCGAGCCTCGCGAAGAGCGAGAGCTCGATCATCATCGAGGGCGAGCCCGGCACCGGGAAGAAGGCGCTCGCCCGAGCGATCCACGACGCATCGTCACGTGCGGGCCGCCCCTTTGTCGTCGTCGAGTGCGCCGGCCTCCCGAGCCAATCGGAGATCGCGGAGACGCTCGAAGAGGCGCTCGGGAGCGCCGAGGGCGGGACGCTCGTGCTCGACGCGCCAGCCGAGCTTCCACTCGCGGTCCAGCGTGAGCTCACGCCTCCGCTCGACGCGAAGGCGTTCCGGGTCATCGTCACGACGCAGCGCGATCTCCGCCGCCTGGTCAACCAGGGCGCGTTCCGCGAGAACCTGTACTTCCGCATCGCGGGCGCGACCGTTCGCGTCCCGCCGCTCCGCGAACGCCCGGGCGATCTCGTCCCGCTCCTCGAGCGATTCCTCGGCGACCAGGCGAGCCTCGCGACGCCGAGCCTCGTCGCCGACCTCGCGCGCCTGCCGTGGATGGGCAACGTGCGCGAGCTCATGCTCTATGCGGAGCAGCTCCGCTCCGGCGACCTCCTGCGCGCCGTCGCGACCGCACGCCTCGACGCCGTCGACTCCGACGACTCGCGCCGCTGGCAGGGCTCGGAAGGCGAGCACGGCACGATGGAGGCACCAACGCTTCCGACGCTCCTCGGCACCGAGCCGGAGGCCGCCGACATCGGACGCATGCTCCCCGTCGCGCTCGAGCCGTGGTTCTTGATCGGCTTCAAGGAGTTCCGCGAGCGCTGGATCGATCTCGGCGAGCGCGAATACCTCCGGCGTCTGATGCTCCGCACGAGTCGCTCGAGCGGGGCGGCTTCGCGTGAAGCAGGCCTCGAGCGCACGTACCTCTACCGGCTGATCAAGAAACACGGCGTCTGA
PROTEIN sequence
Length: 440
VTEGRELEPRAPRCRPQLTWTDAAGTHALELGEARTAGSAVHCELVVADKAVSRLHFELDPQTDGLWVRDLGSRNGTYVNGVRIMEARVPAGSVIRVGTTDMTVSFGNPEPIAPGPPADAPVSFGALDGWSASMREVFATLSSLAKSESSIIIEGEPGTGKKALARAIHDASSRAGRPFVVVECAGLPSQSEIAETLEEALGSAEGGTLVLDAPAELPLAVQRELTPPLDAKAFRVIVTTQRDLRRLVNQGAFRENLYFRIAGATVRVPPLRERPGDLVPLLERFLGDQASLATPSLVADLARLPWMGNVRELMLYAEQLRSGDLLRAVATARLDAVDSDDSRRWQGSEGEHGTMEAPTLPTLLGTEPEAADIGRMLPVALEPWFLIGFKEFRERWIDLGEREYLRRLMLRTSRSSGAASREAGLERTYLYRLIKKHGV*