ggKbase home page

scnpilot_p_inoc_scaffold_1216

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1216_1
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

Not on your lists

1..495
DNA (495bp) protein (165aa)
Proteinase inhibitor I4 serpin id=2272940 bin=GWB2_Elusimicrobia_63_16 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
proteinase inhibitor I4 serpin; K13963 serpin B Tax=GWB2_Elusimicrobia_63_16_curated
serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member
scnpilot_p_inoc_scaffold_1216_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

561..1382
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031B70E0
dienelactone hydrolase-like enzyme
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:AGA31177.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singuli
scnpilot_p_inoc_scaffold_1216_3
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1443..1688)
DNA (246bp) protein (82aa)
Sec-independent protein translocase protein TatA n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=TATA_DESAH
tatA; twin arginine translocase protein A
Sec-independent protein translocase protein TatA {ECO:0000255|HAMAP-Rule:MF_00236}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfob
scnpilot_p_inoc_scaffold_1216_4
unknown

Not on your lists

comp(1753..2799)
DNA (1047bp) protein (349aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1216_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3027..3764
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4S0_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF08841.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_1216_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4139..5824
DNA (1686bp) protein (562aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUD9_SORC5 rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF00666.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="
scnpilot_p_inoc_scaffold_1216_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5918..6463)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUH5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF00678.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_1216_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6531..7823)
DNA (1293bp) protein (431aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN91101.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN91101.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUI2_SORC5 rbh
scnpilot_p_inoc_scaffold_1216_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7874..10330)
DNA (2457bp) protein (819aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXN5_SORCE rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1216_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10353..11429)
DNA (1077bp) protein (359aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016844};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit id=4430646 bin=GWA2_Deltaproteo_65_63 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
pheS; phenylalanyl-tRNA synthetase subunit alpha
scnpilot_p_inoc_scaffold_1216_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11861..13579
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD24_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42325.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1216_12
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13635..14954
DNA (1320bp) protein (440aa)
Sigma-54 dependent transcriptional regulator, Fis family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB26_9DELT
Sigma-54 dependent transcriptional regulator, Fis family protein {ECO:0000313|EMBL:EDM76908.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nanno
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_1216_13
unknown

Not on your lists

comp(15157..15672)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1216_14
unknown

Not on your lists

comp(15816..16331)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1216_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16555..18399
DNA (1845bp) protein (615aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyan
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YB85_SORCE rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1216_16
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18469..19227
DNA (759bp) protein (253aa)
Putative preQ0 transporter n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S1L3_9DELT
Putative preQ0 transporter {ECO:0000313|EMBL:ERK89466.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
hypothetical protein
scnpilot_p_inoc_scaffold_1216_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19230..20576
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRB6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34926.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1216_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20821..21336
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP18_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34927.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1216_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21594..22616
DNA (1023bp) protein (341aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae;
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWH6_SORCE
hypothetical protein
scnpilot_p_inoc_scaffold_1216_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22558..23304)
DNA (747bp) protein (249aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP23_SORCE
hypothetical protein
scnpilot_p_inoc_scaffold_1216_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23406..23720)
DNA (315bp) protein (105aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRC3_SORCE
hypothetical protein
scnpilot_p_inoc_scaffold_1216_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23885..24478
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSS3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34930.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_1216_23
unknown

Not on your lists

24613..24876
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 23 items

View Taxonomy