ggKbase home page

scnpilot_p_inoc_scaffold_1524_11

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(15905..16615)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 236.0
  • Bit_score: 364
  • Evalue 7.90e-98
  • rbh
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 236.0
  • Bit_score: 363
  • Evalue 5.00e-98
  • rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangi similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 236.0
  • Bit_score: 363
  • Evalue 2.50e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
TTGCCGAAGCTGTCCAAGAACCGCGAGAAGGTCGAGAAAGCAGTCGACCGCGCTCGCAAATACACGGTCGAGGAGGCGTGCGCGCTCGTCAAGAGCGCGAAGTTCGCCAAGTTCGACGAGACGGTGGACATTGCCGTCCGCTTGGGAGTCAATCCCAAGCACGCTGACCAGATGGTCCGCGGCGCGCTTGTCCTCCCGCACGGCACCGGTCAGACGGTGCGCGTGCTCGTGTTCGCCAAGGGTGAAAAGGAGCGCGAGGCCCGCGAGGCCGGCGCCGATTTCGCCGGAAGCGACGACATGGTTGCGAAGGTGAGCGAAGGATTCATGGACTTCGATCGCGTTATCGCGACGCCCGACATGATGGGCGCCGTCGGTAAGCTCGGTCGCGTCCTCGGTCCTCGCGGCCTCATGCCGAACCCCAAGGTCGGCACGGTCACCTTCGACATCGGCAACGCTGTTCGCGAAGCGAAGGGCGGCAAGATCGAGTACCGCGTCGAGAAGGCTGGCATCGTCCACGCCCGCATCGGCAAGGTCTCGTTCGCCGACAACGCGCTCGCGGACAACGCGAAGGCGCTCATCGCCGCGCTCGTCCGTGCGAAGCCTTCCACCGCGAAGGGCACGTACGTCCGCAGCATCACCATCAGCTCCACGATGGGCCCCGGCGTCAAGGTTGACCCGGGTCAGTTCATCGGCGGGGCGGAGGAAGGCTGA
PROTEIN sequence
Length: 237
LPKLSKNREKVEKAVDRARKYTVEEACALVKSAKFAKFDETVDIAVRLGVNPKHADQMVRGALVLPHGTGQTVRVLVFAKGEKEREAREAGADFAGSDDMVAKVSEGFMDFDRVIATPDMMGAVGKLGRVLGPRGLMPNPKVGTVTFDIGNAVREAKGGKIEYRVEKAGIVHARIGKVSFADNALADNAKALIAALVRAKPSTAKGTYVRSITISSTMGPGVKVDPGQFIGGAEEG*