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scnpilot_p_inoc_scaffold_1524

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1524_1
unknown

Not on your lists

comp(380..727)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1524_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1343..2323)
DNA (981bp) protein (327aa)
protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5Y3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF06249.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
scnpilot_p_inoc_scaffold_1524_3
unknown

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comp(2712..3026)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1524_4
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3146..3829
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035E7CA7
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KFF87933.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Ser
Helix-turn-helix type 11 domain-containing protein
scnpilot_p_inoc_scaffold_1524_5
unknown

Not on your lists

4133..4792
DNA (660bp) protein (220aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1524_6
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5051..5350
DNA (300bp) protein (100aa)
Protein containing DUF559 n=1 Tax=Rhodopirellula baltica SH28 RepID=K5CD80_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:AHE56545.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
leucyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1524_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5919..10184)
DNA (4266bp) protein (1422aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XG21_SORCE rbh
scnpilot_p_inoc_scaffold_1524_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..14426)
DNA (4134bp) protein (1378aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHR8_SORCE rbh
DNA-directed RNA polymerase subunit beta
scnpilot_p_inoc_scaffold_1524_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14860..15243)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL7_SORC5
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source=
rplL; 50S ribosomal protein L7/L12
scnpilot_p_inoc_scaffold_1524_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15348..15902)
DNA (555bp) protein (185aa)
50S ribosomal protein L10 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL10_SORC5
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang
scnpilot_p_inoc_scaffold_1524_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15905..16615)
DNA (711bp) protein (237aa)
50S ribosomal protein L1 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL1_SORC5 rbh
50S ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangi
scnpilot_p_inoc_scaffold_1524_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16811..17251)
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHM4_SORCE
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiac
scnpilot_p_inoc_scaffold_1524_13
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17578..17802)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJW9_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC46749.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
scnpilot_p_inoc_scaffold_1524_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17892..18425)
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GR99_SORC5
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococca
nusG; transcription antitermination protein NusG
scnpilot_p_inoc_scaffold_1524_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18467..19045)
DNA (579bp) protein (193aa)
Protein translocase subunit SecE n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK70_SORCE
hypothetical protein
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source
scnpilot_p_inoc_scaffold_1524_16
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(19281..19433)
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=RL33_THEM4
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=391009 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho melanesiensis (strain B
scnpilot_p_inoc_scaffold_1524_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19441..19551)
DNA (111bp) protein (37aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQG9_SORCE
tuf; elongation factor Tu; K02358 elongation factor Tu Tax=RBG_16_Gemmatimonadetes_66_8_curated
scnpilot_p_inoc_scaffold_1524_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19548..19877)
DNA (330bp) protein (110aa)
Elongation factor Tu n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JDS7_AGRRK
Translation elongation factor Tu {ECO:0000313|EMBL:AKF10644.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source
tuf; elongation factor Tu
Displaying 18 items

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