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scnpilot_p_inoc_scaffold_2021_11

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 12964..13185

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=2 Tax=Sorangium cellulosum RepID=A9GWS3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 65.0
  • Bit_score: 130
  • Evalue 7.90e-28
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 65.0
  • Bit_score: 130
  • Evalue 2.20e-28
Cold-shock protein {ECO:0000313|EMBL:AGP32469.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 65.0
  • Bit_score: 130
  • Evalue 1.10e-27

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGGCAGTGGGCAAGGTGAAGTGGTTCAACGACGAAAAGGGCTGGGGCTTCATCAAGCAGGACAACGGCCCCGACGTCTTCGTGCACTACTCGCAGATCTCTGGTGATGGCCGCCGCCGCCTCTTCGAGGACGAGATGGTGGAGTTCGAGATCAAGGAGGGCCCGAAGGGGCTCCAGGCGATCAACGTCGTGCGCCAGGCCGGCGCTCCGGCGATGGCCTGA
PROTEIN sequence
Length: 74
MAVGKVKWFNDEKGWGFIKQDNGPDVFVHYSQISGDGRRRLFEDEMVEFEIKEGPKGLQAINVVRQAGAPAMA*