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scnpilot_p_inoc_scaffold_2021

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2021_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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140..1201
DNA (1062bp) protein (354aa)
lipA; lipoyl synthase (EC:2.8.1.-)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate syntha
Lipoyl synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=LIPA_SORC5 rbh
scnpilot_p_inoc_scaffold_2021_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1791..3554
DNA (1764bp) protein (588aa)
Predicted subtilisin like protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0A1_SORC5 rbh
Protease {ECO:0000313|EMBL:EYF04026.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus
subtilisin like protease
scnpilot_p_inoc_scaffold_2021_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3690..4220
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF08267.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
scnpilot_p_inoc_scaffold_2021_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4260..5663)
DNA (1404bp) protein (468aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH27_ANADF rbh
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS28023.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
scnpilot_p_inoc_scaffold_2021_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6255..7367
DNA (1113bp) protein (371aa)
Uncharacterized conserved protein involved in stress response n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJ88_SORC5 rbh
hypothetical protein
Uncharacterized conserved protein involved in stress response {ECO:0000313|EMBL:CAN91930.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiac
scnpilot_p_inoc_scaffold_2021_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7446..8465
DNA (1020bp) protein (340aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF00500.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
scnpilot_p_inoc_scaffold_2021_7
unknown

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comp(8548..8883)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2021_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9093..10652
DNA (1560bp) protein (520aa)
SpoVR family protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK87_SORCE rbh
Stage V sporulation protein involved in spore cortex synthesis (SpoVR) {ECO:0000313|EMBL:EYF01552.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae;
SpoVR family protein rbh
scnpilot_p_inoc_scaffold_2021_9
unknown

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10688..11110
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2021_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11338..12558
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRJ8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34996.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_2021_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12964..13185
DNA (222bp) protein (74aa)
Cold shock protein n=2 Tax=Sorangium cellulosum RepID=A9GWS3_SORC5
cold shock protein
Cold-shock protein {ECO:0000313|EMBL:AGP32469.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
scnpilot_p_inoc_scaffold_2021_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13306..14223)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2H4_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP37083.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_p_inoc_scaffold_2021_13
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(14538..14948)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZA64_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ90112.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211
hypothetical protein
Displaying 13 items

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