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scnpilot_p_inoc_scaffold_4054

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4054_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..995)
DNA (993bp) protein (331aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=2 Tax=Acidovorax RepID=B9MDL2_ACIET
scnpilot_p_inoc_scaffold_4054_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1109..1765)
DNA (657bp) protein (219aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003767941 rbh
scnpilot_p_inoc_scaffold_4054_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1777..3198)
DNA (1422bp) protein (474aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33) rbh
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=3 Tax=Acidovorax RepID=LEUC_ACIAC rbh
scnpilot_p_inoc_scaffold_4054_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3218..3994)
DNA (777bp) protein (259aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D7C63
LysR family transcriptional regulator {ECO:0000313|EMBL:GAD24319.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_4054_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3955..4092)
DNA (138bp) protein (46aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDK7_ACIET
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADV00860.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
scnpilot_p_inoc_scaffold_4054_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4264..4434)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ12_ALIDB
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_4054_7
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4457..4690)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=9 Tax=Comamonadaceae RepID=RL28_ACIET
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquati
scnpilot_p_inoc_scaffold_4054_8
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4849..5805)
DNA (957bp) protein (319aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Thioredoxin reductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB78_ACISJ rbh
thioredoxin reductase
scnpilot_p_inoc_scaffold_4054_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5930..8269
DNA (2340bp) protein (780aa)
cell division protein FtsK n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036201DE rbh
Cell divisionftsk/spoiiie {ECO:0000313|EMBL:GAD20600.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
DNA translocase FtsK
scnpilot_p_inoc_scaffold_4054_10
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8286..9560
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KPG7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC03982.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
sugar ABC transport system, periplasmic substrate-binding protein
scnpilot_p_inoc_scaffold_4054_11
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9572..10906
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae;
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LH54_9GAMM
hybrid histidine protein kinase
scnpilot_p_inoc_scaffold_4054_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10909..11538
DNA (630bp) protein (210aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB76_ACISJ rbh
outer membrane lipoprotein carrier protein LolA
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
scnpilot_p_inoc_scaffold_4054_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11643..12284)
DNA (642bp) protein (214aa)
Two component LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7X7_9BURK
two component LuxR family transcriptional regulator
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:AFU45051.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
scnpilot_p_inoc_scaffold_4054_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12281..14512)
DNA (2232bp) protein (744aa)
Sensor histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW32_9BURK rbh
sensor histidine kinase
Sensor histidine kinase {ECO:0000313|EMBL:AFU45052.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_p_inoc_scaffold_4054_15
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

14551..15342
DNA (792bp) protein (264aa)
Putative uncharacterized protein id=1710251 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4054_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15347..16405)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=CG_Thiomicrospira_01
scnpilot_p_inoc_scaffold_4054_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16572..17636
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPX6_9BURK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45053.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_p_inoc_scaffold_4054_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17743..18099)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KV53_9BURK
hypothetical protein; K08987 putative membrane protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_4054_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18194..18772)
DNA (579bp) protein (193aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
alkylhydroperoxidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F45EB rbh
hypothetical protein
scnpilot_p_inoc_scaffold_4054_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18811..19800)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037805B9 rbh
NADPH:quinone reductase {ECO:0000313|EMBL:GAD20605.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
alcohol dehydrogenase
scnpilot_p_inoc_scaffold_4054_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19822..20385)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368AFA0 rbh
Transcriptional regulator {ECO:0000313|EMBL:GAD20606.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
dhaR; TetR family transcriptional regulator
Displaying 21 items

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