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scnpilot_p_inoc_scaffold_8458

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_8458_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..407)
DNA (405bp) protein (135aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:6.3.2.5)
UPI0003A42D75 related cluster n=1 Tax=unknown RepID=UPI0003A42D75
Phosphopantothenoylcysteine synthetase/decarboxylase {ECO:0000313|EMBL:GAD20777.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
scnpilot_p_inoc_scaffold_8458_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

512..2014
DNA (1503bp) protein (501aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
ctp synthase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D66CD
scnpilot_p_inoc_scaffold_8458_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2018..2875
DNA (858bp) protein (286aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U253_ALIDB rbh
scnpilot_p_inoc_scaffold_8458_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2970..4256
DNA (1287bp) protein (429aa)
enolase (EC:4.2.1.11) rbh
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U251_ALIDB rbh
scnpilot_p_inoc_scaffold_8458_5
unknown

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4407..4496
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_8458_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4570..6300)
DNA (1731bp) protein (577aa)
UPI0003AA51D4 related cluster n=1 Tax=unknown RepID=UPI0003AA51D4 rbh
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:GAD23818.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
biotin carboxylase
scnpilot_p_inoc_scaffold_8458_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6297..8057)
DNA (1761bp) protein (587aa)
Urea amidolyase related protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RMC1_COMTE
Acetyl-COA carboxylase {ECO:0000313|EMBL:KJA09559.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_8458_8
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8062..8814)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377472E
UPF0271 protein AX13_07890 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquat
Lactam utilization protein LamB
scnpilot_p_inoc_scaffold_8458_9
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8870..9637)
DNA (768bp) protein (256aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=3 Tax=Enterobacteriaceae RepID=K8CI68_CROSK rbh
scnpilot_p_inoc_scaffold_8458_10
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9634..9846)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FB8E40
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE35676.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
scnpilot_p_inoc_scaffold_8458_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9877..10674)
DNA (798bp) protein (266aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U249_ALIDB
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU98853.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
scnpilot_p_inoc_scaffold_8458_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..11399)
DNA (714bp) protein (238aa)
Polar amino acid ABC transporter, inner membrane subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U248_ALIDB rbh
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADU98852.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
scnpilot_p_inoc_scaffold_8458_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11396..12085)
DNA (690bp) protein (230aa)
Polar amino acid ABC transporter, inner membrane subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U247_ALIDB rbh
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEB86125.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
scnpilot_p_inoc_scaffold_8458_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12111..12872)
DNA (762bp) protein (254aa)
Extracellular solute-binding protein family 3 n=2 Tax=Alicycliphilus denitrificans RepID=E8U246_ALIDB rbh
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO26951.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_8458_15
Pseudomonas sp. C5pp, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13062..13613
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00037170C4
RNA polymerase sigma 70 {ECO:0000313|EMBL:KIC83407.1}; TaxID=1586081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C
RNA polymerase ECF-subfamily sigma-70 factor
scnpilot_p_inoc_scaffold_8458_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13610..14503
DNA (894bp) protein (298aa)
Transmembrane sensor n=2 Tax=Pseudomonas aeruginosa RepID=U8KD63_PSEAI
Iron siderophore sensor protein {ECO:0000313|EMBL:BAR68876.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
putative transmembrane sensor
scnpilot_p_inoc_scaffold_8458_17
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14695..15162
DNA (468bp) protein (156aa)
TonB-dependent outermembrane ferripyoverdine receptor FpvA n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YPK0_9RHOO
TonB-dependent outermembrane ferripyoverdine receptor FpvA {ECO:0000313|EMBL:ENO84317.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;"
TonB-dependent siderophore receptor
Displaying 17 items

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