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scnpilot_p_inoc_scaffold_1100

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1100_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..911)
DNA (909bp) protein (303aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EA2E9
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:GAD20894.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
acyl-CoA dehydrogenase domain-containing protein
scnpilot_p_inoc_scaffold_1100_2
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(952..2040)
DNA (1089bp) protein (363aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4M1_LEPCP
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACB33460.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (st
scnpilot_p_inoc_scaffold_1100_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2058..2840)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase/isomerase; K07536 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-] id=12553225 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=573060 speci
2-ketocyclohexanecarboxyl-CoA hydrolase (EC:4.1.3.36)
scnpilot_p_inoc_scaffold_1100_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2875..3642)
DNA (768bp) protein (256aa)
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] id=12553224 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_1100_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3952..5268)
DNA (1317bp) protein (439aa)
protease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D2EBF rbh
Peptidase U32 {ECO:0000313|EMBL:GAD21375.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase U32
scnpilot_p_inoc_scaffold_1100_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5324..6211)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003702516 rbh
Transcriptional regulator {ECO:0000313|EMBL:GAD21374.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1100_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6326..7069
DNA (744bp) protein (248aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365ABB5 rbh
Predicted permeases {ECO:0000313|EMBL:GAD21373.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1100_8
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7346..7978
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUN9_DELSC
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF87977.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
scnpilot_p_inoc_scaffold_1100_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7975..9000
DNA (1026bp) protein (342aa)
Anti-FecI sigma factor, FecR n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUP0_DELSC rbh
anti-FecI sigma factor FecR rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEF87978.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain
scnpilot_p_inoc_scaffold_1100_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9292..11847
DNA (2556bp) protein (852aa)
TonB-dependent receptor n=1 Tax=Comamonas sp. B-9 RepID=UPI00039588D6
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ADX45696.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
scnpilot_p_inoc_scaffold_1100_11
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11851..12117
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TB5_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85897.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
scnpilot_p_inoc_scaffold_1100_12
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12119..12412
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TB6_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85896.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
scnpilot_p_inoc_scaffold_1100_13
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12420..14036
DNA (1617bp) protein (539aa)
Putative transmembrane protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TB7_NITEU rbh
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAD85895.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomo
scnpilot_p_inoc_scaffold_1100_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14042..14593)
DNA (552bp) protein (184aa)
chemotaxis protein CheY n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382E554 rbh
Two component Fis family transcriptional regulator {ECO:0000313|EMBL:GAD21372.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
two component Fis family transcriptional regulator rbh
scnpilot_p_inoc_scaffold_1100_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14679..16010)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
histidine kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003778A1D rbh
histidine kinase
scnpilot_p_inoc_scaffold_1100_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15994..16797)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F3B12 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD21370.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
Surfeit locus 1 family protein
scnpilot_p_inoc_scaffold_1100_17
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16797..17219)
DNA (423bp) protein (141aa)
cytochrome C oxidase subunit III n=1 Tax=Acidovorax radicis RepID=UPI0002375BA5
cytochrome o ubiquinol oxidase subunit IV
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:EJE53808.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
scnpilot_p_inoc_scaffold_1100_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17220..17831)
DNA (612bp) protein (204aa)
Cytochrome o ubiquinol oxidase, subunit III n=1 Tax=Acidovorax sp. CF316 RepID=J0UCB1_9BURK rbh
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:EJE53807.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
cytochrome o ubiquinol oxidase subunit III
scnpilot_p_inoc_scaffold_1100_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17824..19833)
DNA (2010bp) protein (670aa)
cytochrome o ubiquinol oxidase subunit I (EC:1.9.3.1) rbh
Cytochrome o ubiquinol oxidase, subunit I n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ28_ALIDB rbh
Cytochrome o ubiquinol oxidase subunit I {ECO:0000313|EMBL:GAD21367.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
scnpilot_p_inoc_scaffold_1100_20
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19826..20839)
DNA (1014bp) protein (338aa)
Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAW0_9BURK
Cytochrome O ubiquinol oxidase {ECO:0000313|EMBL:KJA11923.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax tempe
ubiquinol oxidase subunit II
scnpilot_p_inoc_scaffold_1100_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21098..22441
DNA (1344bp) protein (448aa)
General substrate transporter n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAH9_ALIDK rbh
Arabinose ABC transporter permease {ECO:0000313|EMBL:KJA11924.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax t
general substrate transporter
scnpilot_p_inoc_scaffold_1100_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22547..23512)
DNA (966bp) protein (322aa)
Protein TolA n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ31_ALIDB rbh
protein tola
Protein TolA {ECO:0000313|EMBL:ADU99740.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans
scnpilot_p_inoc_scaffold_1100_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23538..23966)
DNA (429bp) protein (143aa)
biopolymer transport protein ExbD/TolR id=12551109 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_1100_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23980..24681)
DNA (702bp) protein (234aa)
Protein TolQ n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBE3_ACIDE rbh
Protein TolQ {ECO:0000313|EMBL:EER58205.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
protein tolq
scnpilot_p_inoc_scaffold_1100_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24678..25094)
DNA (417bp) protein (139aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I777_9BURK
tol-pal system-associated acyl-CoA thioesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
tol-pal system-associated acyl-CoA thioesterase
scnpilot_p_inoc_scaffold_1100_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25111..26295)
DNA (1185bp) protein (395aa)
Aminotransferase class I and II n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBL8_ACIET
aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACM33697.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebr
scnpilot_p_inoc_scaffold_1100_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26313..26861)
DNA (549bp) protein (183aa)
N utilization substance protein B homolog n=1 Tax=Acidovorax sp. NO-1 RepID=H0C187_9BURK
transcription antitermination factor nusb
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=512030 species="Bacteria; Prote
scnpilot_p_inoc_scaffold_1100_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26858..27328)
DNA (471bp) protein (157aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=12551104 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
scnpilot_p_inoc_scaffold_1100_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27335..28456)
DNA (1122bp) protein (374aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ38_ALIDB rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:AEB84626.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
scnpilot_p_inoc_scaffold_1100_30
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28797..29090)
DNA (294bp) protein (98aa)
Ferredoxin n=1 Tax=Acidovorax sp. NO-1 RepID=H0C184_9BURK
Ferredoxin {ECO:0000313|EMBL:EHL21739.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
ferredoxin
Displaying items 1-30 of 33 in total

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