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scnpilot_p_inoc_scaffold_1363

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1363_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14..1708
DNA (1695bp) protein (565aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B0Z1_DELSC
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
Sensory box protein {ECO:0000313|EMBL:KFJ09441.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomon
scnpilot_p_inoc_scaffold_1363_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1738..2178
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WY42_DELAC
signal-transduction protein
Uncharacterized protein {ECO:0000313|EMBL:EPD37697.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
scnpilot_p_inoc_scaffold_1363_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2225..3268
DNA (1044bp) protein (348aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WEJ2_DELAC rbh
scnpilot_p_inoc_scaffold_1363_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3404..3778)
DNA (375bp) protein (125aa)
Heat shock protein HSP20 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVF2_DELAS
heat shock protein Hsp20 Tax=GWA2_Burkholderiales_64_37_curated
heat shock protein HSP20
scnpilot_p_inoc_scaffold_1363_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3873..5141
DNA (1269bp) protein (423aa)
Putative transporter signal peptide protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9W3_ACIDE
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EZP55058.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
hypothetical protein
scnpilot_p_inoc_scaffold_1363_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5256..6335)
DNA (1080bp) protein (360aa)
Uncharacterized protein family UPF0324 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE35_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein family UPF0324 {ECO:0000313|EMBL:AEB84929.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
scnpilot_p_inoc_scaffold_1363_7
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(6502..7233)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TPS8_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF22136.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gun
scnpilot_p_inoc_scaffold_1363_8
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7289..7828
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037D8107
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_1363_9
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7825..8517
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003775245
ABC transporter-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_1363_10
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8514..9737
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035E2598 rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1363_11
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9925..10683
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035EF4F9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1363_12
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10680..11933
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035CA6E7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1363_13
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12038..14434)
DNA (2397bp) protein (799aa)
TonB-dependent siderophore receptor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z9C9_9RHOO rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ENO88759.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linalo
TonB-dependent outermembrane ferripyoverdine receptor
scnpilot_p_inoc_scaffold_1363_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15530)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003727CAA
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:GAD21840.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_1363_15
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15527..16096)
DNA (570bp) protein (190aa)
Transcriptional regulator, LuxR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X446_COMTE
RNA polymerase sigma factor {ECO:0000313|EMBL:KHA75822.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinoba
RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_1363_16
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16146..17240)
DNA (1095bp) protein (365aa)
Lytic murein transglycosylase B n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9W1_ACIDE
Lytic murein transglycosylase B {ECO:0000313|EMBL:EER58731.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
lytic murein transglycosylase b
scnpilot_p_inoc_scaffold_1363_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17237..19288)
DNA (2052bp) protein (684aa)
Transglutaminase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ59_ALIDB rbh
transglutaminase domain-containing protein
Transglutaminase domain-containing protein {ECO:0000313|EMBL:ADV00101.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyc
scnpilot_p_inoc_scaffold_1363_18
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19360..20334)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TP52_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32740.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
scnpilot_p_inoc_scaffold_1363_19
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20485..21405)
DNA (921bp) protein (307aa)
ATPase associated with various cellular activities, AAA_3 n=2 Tax=Acidovorax RepID=A1W9N0_ACISJ
ATPase
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABM42955.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
scnpilot_p_inoc_scaffold_1363_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21444..22403
DNA (960bp) protein (320aa)
Histone deacetylase superfamily n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ56_ALIDB rbh
histone deacetylase superfamily protein
Histone deacetylase superfamily {ECO:0000313|EMBL:GAO23202.1}; Histone deacetylase superfamily protein {ECO:0000313|EMBL:GAO22098.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteri
scnpilot_p_inoc_scaffold_1363_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22544..23329
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6G7_ACIDE rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EER59939.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
enoyl-CoA hydratase/isomerase
scnpilot_p_inoc_scaffold_1363_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23506..24795
DNA (1290bp) protein (430aa)
MscS Mechanosensitive ion channel n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6G6_ACIDE
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EER59938.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax d
mechanosensitive ion channel protein MscS
scnpilot_p_inoc_scaffold_1363_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25168..25917
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFU4_ACIET
electron transfer flavoprotein alpha/beta-subunit
Electron transfer flavoprotein beta-subunit {ECO:0000313|EMBL:ABM42951.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
scnpilot_p_inoc_scaffold_1363_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25918..26862
DNA (945bp) protein (315aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2J7_9BURK
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:AFU46585.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
scnpilot_p_inoc_scaffold_1363_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26942..28732
DNA (1791bp) protein (597aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB84911.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB84911.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1V5_ALIDB rbh
scnpilot_p_inoc_scaffold_1363_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28844..29182
DNA (339bp) protein (113aa)
2-nitropropane dioxygenase, NPD n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9M3_ACISJ
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABM42948.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
Displaying 26 items

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