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scnpilot_p_inoc_scaffold_1365

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1365_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1106
DNA (1104bp) protein (368aa)
hypothetical protein id=12550636 bin=BDI species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1365_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1173..1874
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G601_ALIDK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86482.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_1365_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1871..2263
DNA (393bp) protein (131aa)
UPF0225 protein Alide_3818 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSS7_ALIDB
hypothetical protein
UPF0225 protein Alide2_4164 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
scnpilot_p_inoc_scaffold_1365_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2325..3857)
DNA (1533bp) protein (511aa)
Extracellular solute-binding protein family 5 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSS4_ALIDB rbh
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADV01525.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ali
scnpilot_p_inoc_scaffold_1365_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3939..5942
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D7712 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD21761.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_p_inoc_scaffold_1365_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6012..6695
DNA (684bp) protein (228aa)
HAD family hydrolase id=12550634 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
HAD family hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
HAD family hydrolase
scnpilot_p_inoc_scaffold_1365_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6689..8125
DNA (1437bp) protein (479aa)
patatin n=1 Tax=Acidovorax radicis RepID=UPI0002376A7A rbh
patatin Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
patatin
scnpilot_p_inoc_scaffold_1365_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8327..9394)
DNA (1068bp) protein (356aa)
Transcriptional regulator, AraC family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG84_ACIET
AraC family transcriptional regulator {ECO:0000313|EMBL:KJA11234.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1365_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9507..11180
DNA (1674bp) protein (558aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Fatty-acyl-CoA synthetase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W5P7_DELAC rbh
Fatty-acyl-CoA synthetase {ECO:0000313|EMBL:EPD34993.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCU
scnpilot_p_inoc_scaffold_1365_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11194..12798
DNA (1605bp) protein (535aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSQ9_ALIDB rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:GAO25070.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
scnpilot_p_inoc_scaffold_1365_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12816..13325
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2N6_ACIDE
dinb family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
dinb family protein
scnpilot_p_inoc_scaffold_1365_12
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13333..14112
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJA11139.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJA11139.1};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acido
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC95_ACISJ rbh
scnpilot_p_inoc_scaffold_1365_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14115..14834
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4X5_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20354.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
scnpilot_p_inoc_scaffold_1365_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14835..16856
DNA (2022bp) protein (674aa)
3-methylcrotonoyl-CoA carboxylase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I922_9BURK
3-methylcrotonoyl-CoA carboxylase subunit alpha {ECO:0000313|EMBL:AFU47799.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
3-methylcrotonoyl-CoA carboxylase subunit alpha
scnpilot_p_inoc_scaffold_1365_15
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16932..18533
DNA (1602bp) protein (534aa)
Sulfatase n=1 Tax=Comamonas testosteroni S44 RepID=D8D4U0_COMTE
Sulfatase {ECO:0000313|EMBL:EXU79644.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
sulfatase
scnpilot_p_inoc_scaffold_1365_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18554..19462
DNA (909bp) protein (303aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AEB86458.1}; EC=4.1.3.4 {ECO:0000313|EMBL:AEB86458.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Pyruvate carboxyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TS28_ALIDB
pyruvate carboxyltransferase
scnpilot_p_inoc_scaffold_1365_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19542..20960)
DNA (1419bp) protein (473aa)
RND efflux system, outer membrane lipoprotein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RPU1_COMTE rbh
RND efflux system, outer membrane lipoprotein {ECO:0000313|EMBL:EHN65836.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="
RND efflux system, outer membrane lipoprotein
scnpilot_p_inoc_scaffold_1365_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20957..24100)
DNA (3144bp) protein (1048aa)
multidrug transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B74B rbh
Multidrug transporter {ECO:0000313|EMBL:KGH30488.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseu
transporter, hydrophobe/amphiphile efflux-1
scnpilot_p_inoc_scaffold_1365_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24114..25382)
DNA (1269bp) protein (423aa)
RND family efflux transporter MFP subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5D5_9BURK rbh
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AFU47790.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
scnpilot_p_inoc_scaffold_1365_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25497..27212)
DNA (1716bp) protein (572aa)
diguanylate cyclase id=12553012 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
diguanylate cyclase
scnpilot_p_inoc_scaffold_1365_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27267..27749
DNA (483bp) protein (161aa)
UPI00039E4774 related cluster n=1 Tax=unknown RepID=UPI00039E4774
Prolyl-tRNA synthetase {ECO:0000313|EMBL:GAD21741.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
prolyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1365_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27746..28006
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS26_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01503.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_1365_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28198..28830
DNA (633bp) protein (211aa)
DSBA oxidoreductase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR05_DELSC rbh
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:EZP57899.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_p_inoc_scaffold_1365_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28769..30004
DNA (1236bp) protein (412aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TS24_ALIDB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01501.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
Displaying 24 items

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