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scnpilot_p_inoc_scaffold_1391

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1391_1
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3100
DNA (3099bp) protein (1033aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thaue
barA; putative sensor-regulator protein (EC:2.7.13.1)
Putative sensor-regulator protein n=1 Tax=Thauera sp. 27 RepID=N6X0Z9_9RHOO rbh
scnpilot_p_inoc_scaffold_1391_2
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3097..4011
DNA (915bp) protein (305aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thauera sp. 27 RepID=N6X7V0_9RHOO rbh
response regulator receiver modulated diguanylate cyclase; K02488 two-component system, cell cycle response regulator Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
response regulator receiver modulated diguanylate cyclase
scnpilot_p_inoc_scaffold_1391_3
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4063..6132
DNA (2070bp) protein (690aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Acidovorax sp. (strain JS42) RepID=SYM_ACISJ rbh
metG; methionyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1391_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6248..7048)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003714F96 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23588.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1391_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7285..7902)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F9684 rbh
Putative threonine efflux protein {ECO:0000313|EMBL:GAD23589.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
lysine exporter protein LysE/YggA
scnpilot_p_inoc_scaffold_1391_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8371..8877
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003605194
Uncharacterized protein {ECO:0000313|EMBL:GAD23590.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_1391_7
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8874..9353
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A662
Uncharacterized protein {ECO:0000313|EMBL:ENO90379.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
hypothetical protein
scnpilot_p_inoc_scaffold_1391_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9386..10012
DNA (627bp) protein (209aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
Manganese superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000367C1BB rbh
scnpilot_p_inoc_scaffold_1391_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10024..10899
DNA (876bp) protein (292aa)
UPI0003D3EC9B related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3EC9B rbh
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:GAD23592.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
zinc/iron permease
scnpilot_p_inoc_scaffold_1391_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10969..11619
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003647493 rbh
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:GAD23594.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
amino acid transport-like protein
scnpilot_p_inoc_scaffold_1391_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11811..12134)
DNA (324bp) protein (108aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361101E
Uncharacterized protein {ECO:0000313|EMBL:GAD23597.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
3-demethylubiquinone-9 3-methyltransferase
scnpilot_p_inoc_scaffold_1391_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12206..13159)
DNA (954bp) protein (318aa)
Cation diffusion facilitator family transporter n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7H2_ACIDE
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:GAO21774.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_1391_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13168..13440)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BR53_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO21773.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
scnpilot_p_inoc_scaffold_1391_14
Aeromonas molluscorum, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13526..14404)
DNA (879bp) protein (293aa)
LysR family transcriptional regulator n=1 Tax=Aeromonas molluscorum 848 RepID=R1GNL6_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EOD53295.1}; TaxID=1268236 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas
Transcriptional regulator, LysR family rbh
scnpilot_p_inoc_scaffold_1391_15
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14506..16038
DNA (1533bp) protein (511aa)
MFS permease n=2 Tax=Alcaligenes RepID=M5J2F7_9BURK rbh
MFS transporter {ECO:0000313|EMBL:KGP03290.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
Transmembrane efflux protein rbh
scnpilot_p_inoc_scaffold_1391_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16070..16471)
DNA (402bp) protein (134aa)
tRNA(fMet)-specific endonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Toxin VapC {ECO:0000256|HAMAP-Rule
tRNA(fMet)-specific endonuclease VapC n=2 Tax=Enterobacteriaceae RepID=M8VSE0_ECOLX
Virulence-associated protein c
scnpilot_p_inoc_scaffold_1391_17
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16468..16701)
DNA (234bp) protein (78aa)
Virulence-assiciated protein MvpT n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HC89_9RHIZ
Virulence-assiciated protein MvpT {ECO:0000313|EMBL:EPE96337.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
plasmid maintenance protein
scnpilot_p_inoc_scaffold_1391_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16728..17459
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003612194 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23603.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_1391_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17542..17865
DNA (324bp) protein (108aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003774F75
Uncharacterized protein {ECO:0000313|EMBL:GAD23606.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_1391_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17932..19455)
DNA (1524bp) protein (508aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BA8E7 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:GAD23607.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_1391_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19502..20719
DNA (1218bp) protein (406aa)
UPI0003D3B980 related cluster n=1 Tax=unknown RepID=UPI0003D3B980 rbh
Benzoate transporter {ECO:0000313|EMBL:GAD23608.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
benzoate transporter rbh
scnpilot_p_inoc_scaffold_1391_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20716..21510
DNA (795bp) protein (265aa)
racemase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003601B3B rbh
Alanine racemase {ECO:0000313|EMBL:GAD23609.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alanine racemase
scnpilot_p_inoc_scaffold_1391_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21644..22126
DNA (483bp) protein (161aa)
Glutamine amidotransferase class-I n=2 Tax=Alicycliphilus denitrificans RepID=E8U0S9_ALIDB
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:GAO24750.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
scnpilot_p_inoc_scaffold_1391_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22123..22983
DNA (861bp) protein (287aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
pyridoxal kinase (EC:2.7.1.35)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035C2EB7 rbh
scnpilot_p_inoc_scaffold_1391_25
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22997..23506)
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULT9_MYXSD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGC48968.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus s
scnpilot_p_inoc_scaffold_1391_26
Vibrio sp. EJY3, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23516..24154)
DNA (639bp) protein (213aa)
NAD-dependent dehydratase n=1 Tax=Aeromonas hydrophila RepID=UPI0003768358 rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEX23986.1}; TaxID=1116375 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. (strain
scnpilot_p_inoc_scaffold_1391_27
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24154..25089)
DNA (936bp) protein (312aa)
alpha/beta hydrolase n=1 Tax=Aeromonas hydrophila RepID=UPI00036F4E37 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KER69063.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" so
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_1391_28
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25161..26075)
DNA (915bp) protein (305aa)
alpha/beta hydrolase n=1 Tax=Aeromonas aquariorum RepID=UPI00029AA9A0 rbh
hypothetical protein rbh
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:ABB06331.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepaci
scnpilot_p_inoc_scaffold_1391_29
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26205..27188
DNA (984bp) protein (328aa)
Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IY76_COMT2 rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACY33320.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
scnpilot_p_inoc_scaffold_1391_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27357..27674
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003710750
Cytochrome c553 {ECO:0000313|EMBL:GAD23612.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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