ggKbase home page

scnpilot_p_inoc_scaffold_1406

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1406_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VY65_9BACT
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
scnpilot_p_inoc_scaffold_1406_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217..825)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
Clp protease proteolytic subunit ClpP n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375E00
ATP-dependent Clp protease, proteolytic subunit ClpP
scnpilot_p_inoc_scaffold_1406_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(963..2276)
DNA (1314bp) protein (438aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEQ5_ALIDK rbh
trigger factor Tig
scnpilot_p_inoc_scaffold_1406_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2522..5716)
DNA (3195bp) protein (1065aa)
Acriflavin resistance protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1L4_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EHL21577.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. N
acriflavin resistance protein
scnpilot_p_inoc_scaffold_1406_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5724..6938)
DNA (1215bp) protein (405aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWS7_ALIDB rbh
efflux transporter, rnd family, mfp subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00717.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
scnpilot_p_inoc_scaffold_1406_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7043..7939
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368AC08 rbh
Phytoene/squalene synthetase {ECO:0000313|EMBL:GAD24822.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
squalene synthase
scnpilot_p_inoc_scaffold_1406_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8102..9562
DNA (1461bp) protein (487aa)
serine dehydratase n=1 Tax=Acidovorax radicis RepID=UPI00023769B5
L-serine dehydratase 1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
L-serine dehydratase 1
scnpilot_p_inoc_scaffold_1406_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9731..10216)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034915B8
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ELS26606.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_1406_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10218..11000
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000367BC85 rbh
siderophore-interacting protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_1406_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11121..13298)
DNA (2178bp) protein (726aa)
TonB-dependent siderophore receptor n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVU8_COMTE rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EED67720.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas t
ferric anguibactin receptor 2
scnpilot_p_inoc_scaffold_1406_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13351..14226)
DNA (876bp) protein (292aa)
Ferric vibrioferrin-binding periplasmicprotein PvuB n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J504_COMT2 rbh
Ferric anguibactin-binding protein {ECO:0000313|EMBL:KGG90811.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo
Ferric vibrioferrin-binding periplasmicprotein PvuB
scnpilot_p_inoc_scaffold_1406_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14271..15041)
DNA (771bp) protein (257aa)
Iron(3+)-hydroxamate import ATP-binding protein FhuC {ECO:0000313|EMBL:CKG99920.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CKG99920.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
BauE protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UED1_ALCXX rbh
ferric siderophore ABC transporter, ATP-binding protein
scnpilot_p_inoc_scaffold_1406_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15038..15985)
DNA (948bp) protein (316aa)
UPI0003D5D429 related cluster n=1 Tax=unknown RepID=UPI0003D5D429 rbh
ferric siderophore ABC transporter, permease protein rbh
Ferric siderophore ABC transporter, permease protein {ECO:0000313|EMBL:AHC45737.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.
scnpilot_p_inoc_scaffold_1406_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15985..16914)
DNA (930bp) protein (310aa)
UPI0003D655A3 related cluster n=1 Tax=unknown RepID=UPI0003D655A3 rbh
Iron(III) dicitrate transport system permease protein FecD rbh
Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:AHC45738.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromob
scnpilot_p_inoc_scaffold_1406_15
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16914..18620)
DNA (1707bp) protein (569aa)
ABC transporter transmembrane region family protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWE7_ACHXA rbh
ABC transporter transmembrane region family protein 4
ABC transporter transmembrane region family protein 4 {ECO:0000313|EMBL:ADP18760.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.
scnpilot_p_inoc_scaffold_1406_16
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18614..20380)
DNA (1767bp) protein (589aa)
ABC transporter (EC:3.6.3.-)
ABC transporter family protein 84 {ECO:0000313|EMBL:ADP18761.1}; EC=3.6.3.- {ECO:0000313|EMBL:ADP18761.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalig
ABC transporter family protein 84 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWE8_ACHXA rbh
scnpilot_p_inoc_scaffold_1406_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20505..21125
DNA (621bp) protein (207aa)
Putative transcriptional regulator, TetR family n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XJH0_ALCXX
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH04739.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" so
scnpilot_p_inoc_scaffold_1406_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21359..21949
DNA (591bp) protein (197aa)
Squalene synthase HpnD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG07_ACIET
squalene synthase hpnd
Squalene synthase HpnD {ECO:0000313|EMBL:ACM32598.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (stra
scnpilot_p_inoc_scaffold_1406_19
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21952..23247
DNA (1296bp) protein (432aa)
Squalene-associated fad-dependent desaturase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1M2_9BURK rbh
Squalene-associated fad-dependent desaturase {ECO:0000313|EMBL:EHL21585.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
amine oxidase
scnpilot_p_inoc_scaffold_1406_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23293..24006
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00030BAE40 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD40513.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_1406_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24076..24288)
DNA (213bp) protein (71aa)
hypothetical protein id=12549718 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1406_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24285..25106)
DNA (822bp) protein (274aa)
Putative integral membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EAV1_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJE49531.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
integral membrane protein
scnpilot_p_inoc_scaffold_1406_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25216..26316
DNA (1101bp) protein (367aa)
ferrochelatase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ferrochelatase id=12549710 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ferrochelatase
scnpilot_p_inoc_scaffold_1406_24
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26313..28721
DNA (2409bp) protein (803aa)
Putative ATP-dependent protease La, putative n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAD7_ACIET rbh
ATP-dependent protease la rbh
Putative ATP-dependent protease La, putative {ECO:0000313|EMBL:ACM33509.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
scnpilot_p_inoc_scaffold_1406_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28732..29613)
DNA (882bp) protein (294aa)
hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003783F1F rbh
Predicted hydrolases or acyltransferase {ECO:0000313|EMBL:GAD21323.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
alpha/beta fold family hydrolase
scnpilot_p_inoc_scaffold_1406_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29658..31844)
DNA (2187bp) protein (729aa)
hydroxybutyrate-dimer hydrolase (EC:3.1.1.22)
Hydroxybutyrate-dimer hydrolase {ECO:0000313|EMBL:ADU99659.1}; EC=3.1.1.22 {ECO:0000313|EMBL:ADU99659.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
Hydroxybutyrate-dimer hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY73_ALIDB rbh
scnpilot_p_inoc_scaffold_1406_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31890..32957)
DNA (1068bp) protein (356aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376621
Inner-membrane translocator {ECO:0000313|EMBL:EER58542.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
inner-membrane translocator
scnpilot_p_inoc_scaffold_1406_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32975..33958)
DNA (984bp) protein (328aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1Z9_9BURK
inner-membrane translocator Tax=GWA2_Burkholderiales_64_37_curated
inner-membrane translocator
scnpilot_p_inoc_scaffold_1406_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34044..34766)
DNA (723bp) protein (241aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVQ8_9BURK
ABC transporter
ABC transporter {ECO:0000313|EMBL:AFU46973.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1406_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34763..35539)
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAF6_ACIDE
ABC transporter related protein {ECO:0000313|EMBL:EER58545.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
ABC transporter-like protein
Displaying items 1-30 of 31 in total

View Taxonomy