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scnpilot_p_inoc_scaffold_1456

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1456_1
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1137
DNA (1137bp) protein (379aa)
Relaxase type IV secretory pathway VirD2 n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LIY5_RALME
virD2; relaxase type IV secretory pathway VirD2
Relaxase type IV secretory pathway VirD2 {ECO:0000313|EMBL:ABF09891.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ra
scnpilot_p_inoc_scaffold_1456_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1353..2696
DNA (1344bp) protein (448aa)
Ferric reductase domain protein transmembrane component domain n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS6_COMTE rbh
ferric reductase rbh
Ferric reductase domain protein transmembrane component domain {ECO:0000313|EMBL:EED68037.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
scnpilot_p_inoc_scaffold_1456_3
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2711..3376
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS5_COMTE rbh
transcriptional regulator rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:KCV66906.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bo
scnpilot_p_inoc_scaffold_1456_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3437..4792
DNA (1356bp) protein (452aa)
Histidine kinase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS4_COMTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ46164.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_1456_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4806..5513)
DNA (708bp) protein (236aa)
membrane protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956E49
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABX35350.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
scnpilot_p_inoc_scaffold_1456_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5555..6109)
DNA (555bp) protein (185aa)
Cytochrome B561 n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS2_COMTE rbh
Cytochrome B561 {ECO:0000313|EMBL:EED68033.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
cytochrome B561
scnpilot_p_inoc_scaffold_1456_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6350..7642
DNA (1293bp) protein (431aa)
UPI0003D3C369 related cluster n=1 Tax=unknown RepID=UPI0003D3C369 rbh
Cation/multidrug efflux system, membrane-fusion component {ECO:0000313|EMBL:GAD22504.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
RND transporter rbh
scnpilot_p_inoc_scaffold_1456_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7656..10751
DNA (3096bp) protein (1032aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTT3_DELAS rbh
cytochrome C peroxidase rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:KCV66894.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
scnpilot_p_inoc_scaffold_1456_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10748..11068
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Comamonadaceae RepID=A9BTT2_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ46169.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_1456_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11065..12363
DNA (1299bp) protein (433aa)
Outer membrane efflux protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR8_COMTE rbh
transporter rbh
Transporter {ECO:0000313|EMBL:AIJ46170.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scnpilot_p_inoc_scaffold_1456_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12350..13132
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR7_COMTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EED68028.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
hypothetical protein
scnpilot_p_inoc_scaffold_1456_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13129..14802
DNA (1674bp) protein (558aa)
Arylsulfatase {ECO:0000313|EMBL:KCV66860.1}; EC=3.1.6.- {ECO:0000313|EMBL:KCV66860.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
Sulfatase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR6_COMTE rbh
sulfatase
scnpilot_p_inoc_scaffold_1456_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15279..16193
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A9BTS7_DELAS rbh
LysR family transcriptional regulator
LysR substrate-binding domain protein {ECO:0000313|EMBL:KCV66872.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_p_inoc_scaffold_1456_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16219..16446
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR4_COMTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ46175.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_1456_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16663..18672
DNA (2010bp) protein (670aa)
TRAG family protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR3_COMTE rbh
TRAG family protein {ECO:0000313|EMBL:EED68024.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
conjugal transfer protein TraG
scnpilot_p_inoc_scaffold_1456_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18669..19133
DNA (465bp) protein (155aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR2_COMTE
CopG family transcripitonal regulator
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:KCV66866.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Borde
scnpilot_p_inoc_scaffold_1456_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19130..20179
DNA (1050bp) protein (350aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYR1_COMTE rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:GAO21827.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
conjugal transfer protein TrbB rbh
scnpilot_p_inoc_scaffold_1456_18
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20176..20448
DNA (273bp) protein (91aa)
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA007 RepID=U9P3Q5_PSEAI
conjugal transfer protein TrbC
TrbC/VIRB2 family protein {ECO:0000313|EMBL:KIN88229.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
Displaying 18 items

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