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scnpilot_p_inoc_scaffold_1470

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1470_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..732
DNA (732bp) protein (244aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY25_9BURK
ribonuclease ph
scnpilot_p_inoc_scaffold_1470_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


778..1383
DNA (606bp) protein (202aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAW8_ACIDE
dITP/XTP pyrophosphatase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
non-canonical purine ntp pyrophosphatase, rdgb/ham1 family
scnpilot_p_inoc_scaffold_1470_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1478..2674
DNA (1197bp) protein (399aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV96_9BURK
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AFU44712.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_p_inoc_scaffold_1470_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2684..2998)
DNA (315bp) protein (105aa)
hypothetical protein id=12553866 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1470_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3077..4303)
DNA (1227bp) protein (409aa)
Sporulation domain protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TT38_ACIAC
sporulation domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
sporulation domain-containing protein
scnpilot_p_inoc_scaffold_1470_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4471..4830
DNA (360bp) protein (120aa)
Uncharacterized protein (Fragment) id=12549715 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1470_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4921..7182
DNA (2262bp) protein (754aa)
TonB-dependent receptor id=12549714 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TonB-dependent receptor
scnpilot_p_inoc_scaffold_1470_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7216..8094)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYA1_ALIDB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99687.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_1470_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8254..9033)
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase n=2 Tax=Delftia acidovorans RepID=S2X646_DELAC rbh
scnpilot_p_inoc_scaffold_1470_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9109..10443)
DNA (1335bp) protein (445aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BY67_9BURK
scnpilot_p_inoc_scaffold_1470_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..11212
DNA (666bp) protein (222aa)
GntR family transcriptional regulator n=1 Tax=Curvibacter lanceolatus RepID=UPI00036AF323 rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABM31707.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_1470_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11226..12197
DNA (972bp) protein (324aa)
urate catabolism protein (EC:3.5.1.41)
Urate catabolism protein {ECO:0000313|EMBL:ACM32514.1}; EC=3.5.1.41 {ECO:0000313|EMBL:ACM32514.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Urate catabolism protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFF1_ACIET rbh
scnpilot_p_inoc_scaffold_1470_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12263..14038
DNA (1776bp) protein (592aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:AEB83743.1}; EC=3.5.1.87 {ECO:0000313|EMBL:AEB83743.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
Amidase, hydantoinase/carbamoylase family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QC42_ACIAP
scnpilot_p_inoc_scaffold_1470_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14035..15288
DNA (1254bp) protein (418aa)
Peptidase dimerization domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXR3_ALIDB rbh
peptidase dimerization domain-containing protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:ADV00831.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
scnpilot_p_inoc_scaffold_1470_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15350..16555)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037718E6 rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:GAO24411.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
diguanylate phosphodiesterase
scnpilot_p_inoc_scaffold_1470_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16533..18323)
DNA (1791bp) protein (597aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCC7_ACIET
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACM33832.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
scnpilot_p_inoc_scaffold_1470_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18539..20026
DNA (1488bp) protein (496aa)
Xanthine permease n=2 Tax=Alicycliphilus denitrificans RepID=E8TXR5_ALIDB rbh
xanthine permease
Xanthine permease {ECO:0000313|EMBL:AEB83740.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrifi
scnpilot_p_inoc_scaffold_1470_18
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20175..21536)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YFD2_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO90225.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
hypothetical protein
scnpilot_p_inoc_scaffold_1470_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21549..21881)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y7G1_9RHOO
DNA-binding protein, putative Tax=CG_Rhodof_04
hypothetical protein
scnpilot_p_inoc_scaffold_1470_20
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21930..22478)
DNA (549bp) protein (183aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YU21_9RHOO
biopolymer transporter ExbD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ENO83449.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera lin
scnpilot_p_inoc_scaffold_1470_21
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22478..23227)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036FC6B4
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_1470_22
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23230..23994)
DNA (765bp) protein (255aa)
Putative TonB protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K327_AZOSB
tonB1; putative TonB protein
Putative TonB protein {ECO:0000313|EMBL:CAL93232.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_p_inoc_scaffold_1470_23
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24007..24768)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000377B5E9
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACK52357.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
scnpilot_p_inoc_scaffold_1470_24
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24794..25888)
DNA (1095bp) protein (365aa)
ABC transporter permease n=1 Tax=Methylocystis parvus RepID=UPI0003667394 rbh
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ACK52358.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocell
scnpilot_p_inoc_scaffold_1470_25
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25968..26168
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P628_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI07233.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
scnpilot_p_inoc_scaffold_1470_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26256..27440)
DNA (1185bp) protein (395aa)
Possible periplasmic iron siderophore binding protein of ABC transporter n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7E9_RHOPA
ABC transporter periplasmic iron siderophore binding protein
Possible periplasmic iron siderophore binding protein of ABC transporter {ECO:0000313|EMBL:CAE27749.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac
scnpilot_p_inoc_scaffold_1470_27
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27440..28510)
DNA (1071bp) protein (357aa)
Putative ATPase n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R2N8_NOCCG
putative ATPase
Putative ATPase {ECO:0000313|EMBL:CCF61888.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
scnpilot_p_inoc_scaffold_1470_28
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28565..30949)
DNA (2385bp) protein (795aa)
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas syringae pv. lachrymans str. M301315 RepID=F3E9Y8_PSESL
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EGH82971.1}; TaxID=629260 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amyg
TonB-dependent siderophore receptor
scnpilot_p_inoc_scaffold_1470_29
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31412..32473)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETK9_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52361.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
scnpilot_p_inoc_scaffold_1470_30
unknown

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comp(32499..33509)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0003741DC8
Displaying items 1-30 of 38 in total

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