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scnpilot_p_inoc_scaffold_1639

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1639_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1639_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197..559
DNA (363bp) protein (121aa)
pilus biosynthesis protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002377EE7
type IV pilus assembly PilZ Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
type IV pilus assembly PilZ
scnpilot_p_inoc_scaffold_1639_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(610..717)
DNA (108bp) protein (36aa)
Transposase mutator type {ECO:0000313|EMBL:EFI61495.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_1639_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(782..2269)
DNA (1488bp) protein (496aa)
ribonuclease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365D9B5 rbh
ribonuclease, rne/rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ADU99903.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
scnpilot_p_inoc_scaffold_1639_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2406..3242)
DNA (837bp) protein (279aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AEB84719.1}; EC=2.1.1.107 {ECO:0000313|EMBL:AEB84719.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
Uroporphyrin-III C-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0G7_ALIDB rbh
uroporphyrin-III C-methyltransferase
scnpilot_p_inoc_scaffold_1639_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3456..5177
DNA (1722bp) protein (574aa)
hydroxylamine reductase (EC:1.7.99.1)
Hydroxylamine reductase {ECO:0000313|EMBL:ACM33174.1}; EC=1.7.99.1 {ECO:0000313|EMBL:ACM33174.1};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein n=2 Tax=Acidovorax RepID=A1W767_ACISJ rbh
scnpilot_p_inoc_scaffold_1639_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5199..5555
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ35_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33173.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_p_inoc_scaffold_1639_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5552..6763
DNA (1212bp) protein (404aa)
protein nirF n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036419D2 rbh
Cytochrome d1, heme region {ECO:0000313|EMBL:GAD22025.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
cytochrome d1 heme subunit
scnpilot_p_inoc_scaffold_1639_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6788..7729
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0G3_ALIDB
hypothetical protein
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAO23491.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
scnpilot_p_inoc_scaffold_1639_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7797..8282
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0G3_ALIDB
hypothetical protein
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAO23491.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
scnpilot_p_inoc_scaffold_1639_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8272..8751
DNA (480bp) protein (160aa)
protein nirH n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BD0CE rbh
Transcriptional regulator {ECO:0000313|EMBL:GAD22022.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S
AsnC family transcriptional regulator
scnpilot_p_inoc_scaffold_1639_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8756..9976
DNA (1221bp) protein (407aa)
radical SAM protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A005E rbh
Radical SAM domain-containing protein {ECO:0000313|EMBL:GAD22021.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
radical SAM domain-containing protein rbh
scnpilot_p_inoc_scaffold_1639_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9969..11666
DNA (1698bp) protein (566aa)
Cytochrome d1 heme region n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ29_ACIET rbh
cytochrome d1 heme region rbh
Cytochrome d1 heme region {ECO:0000313|EMBL:ACM33167.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (s
scnpilot_p_inoc_scaffold_1639_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11663..12280
DNA (618bp) protein (206aa)
putative cytochrome c oxidase subunit 3 (EC:1.9.3.1)
cytochrome C oxidase n=1 Tax=Acidovorax radicis RepID=UPI00023754E1
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EER58931.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax de
scnpilot_p_inoc_scaffold_1639_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12359..12628
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754E0
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1639_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12738..13172
DNA (435bp) protein (145aa)
cytochrome C n=1 Tax=Acidovorax radicis RepID=UPI00023754DF
putative nitric-oxide reductase subunit C; K02305 nitric oxide reductase subunit C Tax=CG_Rhodof_02
putative nitric-oxide reductase subunit C
scnpilot_p_inoc_scaffold_1639_17
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13189..14682
DNA (1494bp) protein (498aa)
nitric oxide reductase n=1 Tax=Acidovorax radicis RepID=UPI00023754DE rbh
cytochrome c oxidase subunit I
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ACB33736.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain AT
scnpilot_p_inoc_scaffold_1639_18
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14759..15565
DNA (807bp) protein (269aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z3_LEPCP rbh
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ACB33735.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Lepto
scnpilot_p_inoc_scaffold_1639_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15641..17488
DNA (1848bp) protein (616aa)
Nitric oxide reductase activation protein NorD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM22_RUBGI rbh
norD; nitric oxide reductase activation protein NorD
Nitric oxide reductase activation protein NorD {ECO:0000313|EMBL:BAL94059.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gela
scnpilot_p_inoc_scaffold_1639_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17696..18439
DNA (744bp) protein (248aa)
Cyclic nucleotide-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F9_ALIDB rbh
cyclic nucleotide-binding protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEB84711.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
scnpilot_p_inoc_scaffold_1639_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18604..19209)
DNA (606bp) protein (202aa)
Maf-like protein Alide_2154 n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F8_ALIDB rbh
maf protein
Maf-like protein Alide_2154 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
scnpilot_p_inoc_scaffold_1639_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19259..19726)
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Acidovorax RepID=K0I1P9_9BURK
rRNA large subunit methyltransferase
scnpilot_p_inoc_scaffold_1639_23
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19744..20490)
DNA (747bp) protein (249aa)
Ribosomal silencing factor RsfS n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ25_ACIET rbh
iojap-like protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_1639_24
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20671..21615)
DNA (945bp) protein (315aa)
coproporphyrinogen III oxidase (EC:1.3.3.3) rbh
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS25_ACIAC rbh
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
scnpilot_p_inoc_scaffold_1639_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21615..22895)
DNA (1281bp) protein (427aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376EED3
scnpilot_p_inoc_scaffold_1639_26
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22924..23643)
DNA (720bp) protein (240aa)
Probable transcriptional regulatory protein HGR_00425 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNU0_9BURK
Probable transcriptional regulatory protein AX13_00585 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamona
hypothetical protein
scnpilot_p_inoc_scaffold_1639_27
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23886..25403
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1Q3_9BURK
ATP-binding protein {ECO:0000313|EMBL:KJA12425.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
Displaying 27 items

View Taxonomy