ggKbase home page

scnpilot_p_inoc_scaffold_1721

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1721_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..561
DNA (561bp) protein (187aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I198_9BURK
GntR family transcriptional regulator
GntR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1721_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

561..761
DNA (201bp) protein (67aa)
SlyX family protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CFDF1
SlyX family protein {ECO:0000313|EMBL:GAD24246.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SlyX family protein
scnpilot_p_inoc_scaffold_1721_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

775..1236
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B9E30
Uncharacterized protein {ECO:0000313|EMBL:GAD24242.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_1721_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1245..1475
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BVW7_DELAS
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1721_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1560..1982)
DNA (423bp) protein (141aa)
Globin-like protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TMH1_ACIAC
globin-like protein
Globin-like protein {ECO:0000313|EMBL:ABM32159.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strai
scnpilot_p_inoc_scaffold_1721_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2008..2724)
DNA (717bp) protein (239aa)
Iron-sulfur cluster repair di-iron protein n=2 Tax=Alicycliphilus denitrificans RepID=F4GC47_ALIDK rbh
iron-sulfur cluster repair di-iron protein
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ADV00952.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_1721_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2823..3302
DNA (480bp) protein (160aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Alicycliphilus denitrificans RepID=E8TZD0_ALIDB
BadM/Rrf2 family transcriptional regulator
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:GAO21299.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
scnpilot_p_inoc_scaffold_1721_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3364..4287)
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAL2_ACISJ rbh
chromosome replication initiation inhibitor protein rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM43287.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_1721_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4358..5005
DNA (648bp) protein (216aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MD12_ACIET rbh
lysine exporter protein LysE/YggA rbh
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ACM33944.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_1721_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5099..5887)
DNA (789bp) protein (263aa)
Lipoprotein, YaeC family n=2 Tax=Acidovorax RepID=A1WAL0_ACISJ rbh
YaeC family lipoprotein
Lipoprotein, YaeC family {ECO:0000313|EMBL:ACM33943.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
scnpilot_p_inoc_scaffold_1721_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..6827)
DNA (714bp) protein (238aa)
Phosphoserine phosphatase SerB n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUU4_9BURK
phosphoserine phosphatase SerB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
phosphoserine phosphatase SerB
scnpilot_p_inoc_scaffold_1721_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6899..7069)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E8_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59949.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
scnpilot_p_inoc_scaffold_1721_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7161..7832)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I663_9BURK
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1721_14
unknown

Not on your lists

7905..8123
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1721_15
unknown

Not on your lists

8414..9166
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00037AA054
scnpilot_p_inoc_scaffold_1721_16
unknown

Not on your lists

9184..9810
DNA (627bp) protein (209aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1721_17
unknown

Not on your lists

9872..10513
DNA (642bp) protein (214aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1721_18
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10525..13125)
DNA (2601bp) protein (867aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002EA1962 rbh
regulatory protein LuxR rbh
Regulatory protein, LuxR {ECO:0000313|EMBL:ABQ68882.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas w
scnpilot_p_inoc_scaffold_1721_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13134..16604)
DNA (3471bp) protein (1157aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=596154 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDB8_ALIDK rbh
transcription-repair coupling factor
scnpilot_p_inoc_scaffold_1721_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16675..17499
DNA (825bp) protein (275aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDB7_ALIDK rbh
scnpilot_p_inoc_scaffold_1721_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17510..18001
DNA (492bp) protein (164aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] id=12552705 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
scnpilot_p_inoc_scaffold_1721_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18083..19579)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
Histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E3_ACIDE
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1721_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19645..20376)
DNA (732bp) protein (244aa)
UPI0003D3DCEE related cluster n=1 Tax=unknown RepID=UPI0003D3DCEE rbh
Osmolarity response regulator {ECO:0000313|EMBL:GAD24864.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
ompR; osmolarity response regulator
scnpilot_p_inoc_scaffold_1721_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20630..21310
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E1_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59942.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
hypothetical protein
scnpilot_p_inoc_scaffold_1721_25
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21381..22163)
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EHL21485.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EHL21485.1};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1C2_9BURK
scnpilot_p_inoc_scaffold_1721_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22234..23163
DNA (930bp) protein (310aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I115_9BURK
alpha/beta fold family hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
alpha/beta fold family hydrolase
scnpilot_p_inoc_scaffold_1721_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23160..25388
DNA (2229bp) protein (743aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XZ10_DELAC rbh
GTP pyrophosphokinase {ECO:0000313|EMBL:EPD44739.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 27
scnpilot_p_inoc_scaffold_1721_28
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25884..26180
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JL41_AERHY
Uncharacterized protein {ECO:0000313|EMBL:EKB27263.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SS
putative vacuolar-type H+ATPase subunit A
scnpilot_p_inoc_scaffold_1721_29
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26212..28104)
DNA (1893bp) protein (631aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBI0_ACIAP
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
scnpilot_p_inoc_scaffold_1721_30
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28201..28869)
DNA (669bp) protein (223aa)
Uncharacterized protein family UPF0126 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AVV3_DELSC rbh
hypothetical protein
Uncharacterized protein family UPF0126 {ECO:0000313|EMBL:AEF89186.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp
Displaying items 1-30 of 44 in total

View Taxonomy