ggKbase home page

scnpilot_p_inoc_scaffold_1767

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1767_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1442)
DNA (1440bp) protein (480aa)
TonB-dependent receptor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APS5_DELSC rbh
TonB dependent receptor family protein {ECO:0000313|EMBL:KFJ10933.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
TonB-dependent receptor
scnpilot_p_inoc_scaffold_1767_2
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1694..2062)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WX50_DELAC
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1767_3
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2572..2769)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W8A0_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ04777.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
transmembrane protein
scnpilot_p_inoc_scaffold_1767_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3106..3417)
DNA (312bp) protein (104aa)
transcriptional regulator n=1 Tax=Cupriavidus sp. WS RepID=UPI00035C4372
ygaV; DNA-binding transcriptional regulator
Putative transcriptional activator {ECO:0000313|EMBL:AAN62123.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
scnpilot_p_inoc_scaffold_1767_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3504..4373
DNA (870bp) protein (290aa)
beta-lactamase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B6D49 rbh
Metallo-beta-lactamase {ECO:0000313|EMBL:GAD20439.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
Beta-lactamase-like
scnpilot_p_inoc_scaffold_1767_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..5055
DNA (378bp) protein (126aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Ps
alkylhydroperoxidase n=1 Tax=Cupriavidus sp. WS RepID=UPI00036A23D0
alkylhydroperoxidase AhpD core
scnpilot_p_inoc_scaffold_1767_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5138..5509
DNA (372bp) protein (124aa)
sulfur reduction protein DsrE n=1 Tax=Cupriavidus sp. WS RepID=UPI00036DF932
hypothetical protein
Putative uncharacterized protein ORF C33 {ECO:0000313|EMBL:AAN62126.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
scnpilot_p_inoc_scaffold_1767_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5865..7235)
DNA (1371bp) protein (457aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] id=12552123 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
tryptophanase (EC:4.1.99.1)
scnpilot_p_inoc_scaffold_1767_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7501..8466
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S6_ALIDB rbh
hypothetical protein
ABC transporter periplasmic protein {ECO:0000313|EMBL:GAO23235.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
scnpilot_p_inoc_scaffold_1767_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8563..9450
DNA (888bp) protein (296aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8U1S7_ALIDB rbh
inner-membrane translocator
Transmembrane protein {ECO:0000313|EMBL:GAO23234.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
scnpilot_p_inoc_scaffold_1767_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9470..10264
DNA (795bp) protein (265aa)
ABC transporter related protein n=2 Tax=Acidovorax RepID=A1W7A2_ACISJ rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABM42127.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_1767_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..11866
DNA (1473bp) protein (491aa)
Lysine-specific permease n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X0Z8_DELAC rbh
Lysine-specific permease {ECO:0000313|EMBL:EPD45421.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
amino acid permease-associated protein
scnpilot_p_inoc_scaffold_1767_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11988..12326)
DNA (339bp) protein (113aa)
UPI0003D3B486 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3B486
Regulator of competence-specific genes {ECO:0000313|EMBL:GAD23330.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
hypothetical protein
scnpilot_p_inoc_scaffold_1767_14
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12596..12829
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B3FED
virulence-associated protein and related protein
Virulence-associated protein and related protein {ECO:0000313|EMBL:BAO80802.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamona
scnpilot_p_inoc_scaffold_1767_15
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12829..13239
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
pirin n=1 Tax=Curvibacter lanceolatus RepID=UPI000371AB63
predicted nucleic acid-binding protein, contains PIN domain
scnpilot_p_inoc_scaffold_1767_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13258..13713)
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=3 Tax=Comamonas testosteroni RepID=B7X5J6_COMTE
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHN65814.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
scnpilot_p_inoc_scaffold_1767_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13924..15465)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WJW5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD32962.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
AMP-dependent synthetase/ligase
scnpilot_p_inoc_scaffold_1767_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15524..16855)
DNA (1332bp) protein (444aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI00036F4DD8
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ABX34037.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
Displaying 18 items

View Taxonomy