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scnpilot_p_inoc_scaffold_5962

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5962_1
unknown

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comp(3..95)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5962_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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223..522
DNA (300bp) protein (100aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Acidovorax sp. CF316 RepID=J1ES55_9BURK
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EJE55016.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
scnpilot_p_inoc_scaffold_5962_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(580..1086)
DNA (507bp) protein (169aa)
Redoxin domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVI7_ALIDB rbh
redoxin domain-containing protein
Thioredoxin fold-haboring protein {ECO:0000313|EMBL:GAO26103.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
scnpilot_p_inoc_scaffold_5962_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1168..1437)
DNA (270bp) protein (90aa)
30S ribosomal protein S17-like id=12553588 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
rpsQ; 30S ribosomal protein S17
scnpilot_p_inoc_scaffold_5962_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1451..1648)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=4 Tax=Delftia RepID=RL29_DELAS
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
scnpilot_p_inoc_scaffold_5962_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1659..2075)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=4 Tax=Delftia RepID=RL16_DELAS
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.
scnpilot_p_inoc_scaffold_5962_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2078..2947)
DNA (870bp) protein (290aa)
30S ribosomal protein S3 n=5 Tax=Bacteria RepID=A9BPS4_DELAS rbh
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
scnpilot_p_inoc_scaffold_5962_8
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2965..3297)
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=2 Tax=Acidovorax RepID=F0Q4G3_ACIAP
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
scnpilot_p_inoc_scaffold_5962_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3307..3582)
DNA (276bp) protein (92aa)
UPI0003D3F5E3 related cluster n=1 Tax=unknown RepID=UPI0003D3F5E3
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
30S ribosomal protein S19
scnpilot_p_inoc_scaffold_5962_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3593..4417)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Acidovorax sp. (strain JS42) RepID=RL2_ACISJ rbh
rplB; 50S ribosomal protein L2 rbh
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
scnpilot_p_inoc_scaffold_5962_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4421..4735)
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=2 Tax=Acidovorax RepID=A1TJ09_ACIAC
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temper
scnpilot_p_inoc_scaffold_5962_12
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4732..5352)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q4F9_ACIAP rbh
50S ribosomal protein L4/L1e
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae
scnpilot_p_inoc_scaffold_5962_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5352..6026)
DNA (675bp) protein (225aa)
50S ribosomal protein L3 n=2 Tax=Acidovorax RepID=RL3_ACIET rbh
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (s
scnpilot_p_inoc_scaffold_5962_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6221..6532)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=12 Tax=Comamonadaceae RepID=RS10_ACIAC
ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
scnpilot_p_inoc_scaffold_5962_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6563..6721)
DNA (159bp) protein (53aa)
Elongation factor Tu n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYL2_9BURK
translation elongation factor Tu
Translation elongation factor Tu {ECO:0000313|EMBL:EHL21257.1}; Flags: Fragment;; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
Displaying 15 items

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