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scnpilot_p_inoc_scaffold_2022

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2022_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..660
DNA (660bp) protein (220aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBZ6_ACISJ
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACM34403.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
scnpilot_p_inoc_scaffold_2022_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(755..2404)
DNA (1650bp) protein (550aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUF0_9BURK
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EHL23922.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_2022_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2545..4389)
DNA (1845bp) protein (615aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short
Phosphomethylpyrimidine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=THIC_ACIET rbh
thiamine biosynthesis protein thic
scnpilot_p_inoc_scaffold_2022_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4605..4781)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237550F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2022_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4788..5711)
DNA (924bp) protein (308aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR58_ALIDB rbh
udp-3-0-acyl n-acetylglucosamine deacetylase
scnpilot_p_inoc_scaffold_2022_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5886..7112)
DNA (1227bp) protein (409aa)
Cell division protein FtsZ n=2 Tax=Acidovorax RepID=A1WC01_ACISJ
cell division protein Ftsz
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
scnpilot_p_inoc_scaffold_2022_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7267..8496)
DNA (1230bp) protein (410aa)
Cell division protein ftsA n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFQ8_ACIET
cell division protein Ftsa
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
scnpilot_p_inoc_scaffold_2022_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8535..9329)
DNA (795bp) protein (265aa)
Cell division protein FtsQ n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6U6_ACIDE
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
polypeptide-transport-associated domain-containing protein
scnpilot_p_inoc_scaffold_2022_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9326..10330)
DNA (1005bp) protein (335aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
d-alanine/d-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FFC08 rbh
scnpilot_p_inoc_scaffold_2022_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10327..11769)
DNA (1443bp) protein (481aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6U4_ACIDE
scnpilot_p_inoc_scaffold_2022_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11766..12830)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR71_ALIDB rbh
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
scnpilot_p_inoc_scaffold_2022_12
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12827..14098)
DNA (1272bp) protein (424aa)
Lipid II flippase FtsW n=2 Tax=Alicycliphilus denitrificans RepID=E8TR72_ALIDB rbh
cell division protein FtsW
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
scnpilot_p_inoc_scaffold_2022_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14095..15747)
DNA (1653bp) protein (551aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BUK4_DELAS
UDP-N-acetylmuramoylalanine--D-glutamate ligase
scnpilot_p_inoc_scaffold_2022_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15744..16922)
DNA (1179bp) protein (393aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUG3_9BURK
scnpilot_p_inoc_scaffold_2022_15
unknown

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comp(16913..16996)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 15 items

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