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scnpilot_p_inoc_scaffold_2032

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2032_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..836)
DNA (834bp) protein (278aa)
protein serine/threonine phosphatase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037524D5
protein serine/threonine phosphatase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
protein serine/threonine phosphatase
scnpilot_p_inoc_scaffold_2032_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(833..1855)
DNA (1023bp) protein (341aa)
Serine/threonine protein kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP11_9BURK
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFU44708.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_2032_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1934..2845
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV93_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44707.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_p_inoc_scaffold_2032_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2911..3531
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T347_ACIDE
scnpilot_p_inoc_scaffold_2032_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3550..3753
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=4 Tax=Comamonadaceae RepID=RPOZ_ACIET
scnpilot_p_inoc_scaffold_2032_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3853..5529
DNA (1677bp) protein (559aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N2_9BURK
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:KJA09141.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
(p)ppGpp synthetase I SpoT/RelA
scnpilot_p_inoc_scaffold_2032_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5475..5972
DNA (498bp) protein (166aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N2_9BURK
(p)ppGpp synthetase I SpoT/RelA
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:AFU44704.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_2032_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5976..6542)
DNA (567bp) protein (189aa)
Transcription elongation factor GreB n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP08_9BURK
transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobac
scnpilot_p_inoc_scaffold_2032_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7053..8210
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QLV9_BORBO rbh
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI14323.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxy
scnpilot_p_inoc_scaffold_2032_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8805..9668
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GI27_PSEST rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA85661.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutze
scnpilot_p_inoc_scaffold_2032_11
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9753..12833)
DNA (3081bp) protein (1027aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GY15_METFK rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE50872.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus
hypothetical protein rbh
scnpilot_p_inoc_scaffold_2032_12
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12837..13448)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A7Q3_ALKEH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI57134.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimni
scnpilot_p_inoc_scaffold_2032_13
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13445..14737)
DNA (1293bp) protein (431aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A7Q2_ALKEH rbh
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:ABI57135.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae;
scnpilot_p_inoc_scaffold_2032_14
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14734..15822)
DNA (1089bp) protein (363aa)
Virulence protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GY17_METFK rbh
virulence protein rbh
Virulence protein {ECO:0000313|EMBL:ABE50870.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flage
scnpilot_p_inoc_scaffold_2032_15
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15819..18005)
DNA (2187bp) protein (729aa)
N-6 DNA methylase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GY18_METFK rbh
N-6 DNA methylase rbh
N-6 DNA methylase {ECO:0000313|EMBL:ABE50869.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flage
scnpilot_p_inoc_scaffold_2032_16
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18087..19079)
DNA (993bp) protein (331aa)
Restriction endonuclease n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZL1_9BURK rbh
Restriction endonuclease {ECO:0000313|EMBL:EFV94005.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis
Restriction endonuclease rbh
scnpilot_p_inoc_scaffold_2032_17
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19106..19321)
DNA (216bp) protein (72aa)
Transcriptional regulator, MarR family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZL2_9BURK
Regulatory protein MarR {ECO:0000313|EMBL:KGP02764.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2032_18
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19703..20914)
DNA (1212bp) protein (404aa)
Integrase n=1 Tax=Thauera phenylacetica B4P RepID=N6Z1I0_9RHOO rbh
Integrase {ECO:0000313|EMBL:ENO97735.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
integrase
scnpilot_p_inoc_scaffold_2032_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21163..22098)
DNA (936bp) protein (312aa)
GTP-binding protein YchF n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379F483
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
GTP-binding protein YchF
scnpilot_p_inoc_scaffold_2032_20
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22187..23341
DNA (1155bp) protein (385aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T398_ACIDE
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:EER61062.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acid
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase
scnpilot_p_inoc_scaffold_2032_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23345..24109
DNA (765bp) protein (255aa)
Disulfide bond isomerase, DsbC/G-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR15_ALIDB
Disulfide isomerase {ECO:0000313|EMBL:KJA09977.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
disulfide bond isomerase DsbC/G
scnpilot_p_inoc_scaffold_2032_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24135..25988
DNA (1854bp) protein (618aa)
Peptidase M61 domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFT5_ALIDK rbh
Peptidase m61 domain-containing protein {ECO:0000313|EMBL:GAO24918.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
peptidase m61 domain-containing protein
scnpilot_p_inoc_scaffold_2032_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26043..26822
DNA (780bp) protein (260aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003626732 rbh
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:GAD23780.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
scnpilot_p_inoc_scaffold_2032_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27012..28349
DNA (1338bp) protein (446aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Acidovorax sp. (strain JS42) RepID=MIAB_ACISJ rbh
(dimethylallyl)adenosine tRNA methylthiotransferase
scnpilot_p_inoc_scaffold_2032_25
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28552..29934)
DNA (1383bp) protein (461aa)
Putative amino acid aldolase or racemase n=1 Tax=Acidovorax sp. CF316 RepID=J1E8K9_9BURK rbh
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJE48614.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
ptpT; deaminase
scnpilot_p_inoc_scaffold_2032_26
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29931..30977)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A547_METMM rbh
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_2032_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31087..31905)
DNA (819bp) protein (273aa)
Redoxin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0J4_ALIDB rbh
redoxin domain-containing protein
Redoxin domain-containing protein {ECO:0000313|EMBL:GAO23454.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
Displaying 27 items

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