ggKbase home page

scnpilot_p_inoc_scaffold_2041

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2041_1
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..353)
DNA (351bp) protein (117aa)
sodium:proton antiporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00036DD68C
Sodium:proton antiporter {ECO:0000313|EMBL:KDP83353.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. S
Na+/H+ antiporter NhaP
scnpilot_p_inoc_scaffold_2041_2
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

565..1104
DNA (540bp) protein (180aa)
RNA polymerase sigma factor, FecI family n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXX5_PSEMN
FecI family RNA polymerase sigma factor
RNA polymerase sigma factor, FecI family {ECO:0000313|EMBL:AEB56327.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
scnpilot_p_inoc_scaffold_2041_3
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1104..1985
DNA (882bp) protein (294aa)
Anti-sigma factor protein, FecR family n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXX6_PSEMN
FecR family anti-sigma factor protein
Anti-sigma factor protein, FecR family {ECO:0000313|EMBL:AEB56328.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
scnpilot_p_inoc_scaffold_2041_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2077..4647
DNA (2571bp) protein (857aa)
TonB-dependent siderophore receptor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YFW1_9RHOO rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ENO90375.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linalo
Fe(3+)-pyochelin receptor
scnpilot_p_inoc_scaffold_2041_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4657..5562)
DNA (906bp) protein (302aa)
folate-binding protein n=1 Tax=Acidovorax avenae RepID=UPI0002E39FA6 rbh
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:EHL20846.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
glycine cleavage T protein (aminomethyl transferase)
scnpilot_p_inoc_scaffold_2041_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5611..6600
DNA (990bp) protein (330aa)
Aminodeoxychorismate lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY39_9BURK
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AFU45837.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS1
scnpilot_p_inoc_scaffold_2041_7
unknown

Not on your lists

6597..6764
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2041_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6766..7422
DNA (657bp) protein (219aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1603291 species="Bacteria; Proteobacteria; Bet
Thymidylate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUW9_ALIDB
scnpilot_p_inoc_scaffold_2041_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7419..8414
DNA (996bp) protein (332aa)
DNA-directed DNA polymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3S6_9BURK
DNA-directed DNA polymerase
DNA-directed DNA polymerase {ECO:0000313|EMBL:AFU45839.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS
scnpilot_p_inoc_scaffold_2041_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8433..8792
DNA (360bp) protein (120aa)
Type IV pilus assembly pilz n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q5_9BURK
type IV pilus assembly pilz
Type IV pilus assembly pilz {ECO:0000313|EMBL:AFU45840.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS
scnpilot_p_inoc_scaffold_2041_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8831..9655
DNA (825bp) protein (275aa)
Hydrolase, TatD family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4N8_ACIDE
Hydrolase, TatD family {ECO:0000313|EMBL:EER60573.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
TatD family hydrolase
scnpilot_p_inoc_scaffold_2041_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9652..10323
DNA (672bp) protein (224aa)
ankyrin id=12550545 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ankyrin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
ankyrin
scnpilot_p_inoc_scaffold_2041_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10386..12173)
DNA (1788bp) protein (596aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; B
lipid A ABC transporter ATPase/inner membrane protein MsbA (EC:3.6.3.44)
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4N6_ACIDE
scnpilot_p_inoc_scaffold_2041_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12295..13611
DNA (1317bp) protein (439aa)
Protein TolB n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3T0_9BURK
tolB; translocation protein TolB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2041_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13659..14195
DNA (537bp) protein (179aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q9_9BURK
peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:AFU45845.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
scnpilot_p_inoc_scaffold_2041_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14195..14788
DNA (594bp) protein (198aa)
tol-pal system protein YbgF n=1 Tax=Acidovorax avenae RepID=UPI00030B2552
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:ADX45745.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
Displaying 16 items

View Taxonomy