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scnpilot_p_inoc_scaffold_2565

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2565_1
Burkholderia sp. JS667, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(541..732)
DNA (192bp) protein (64aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=622617 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkhol
4-oxalocrotonate tautomerase n=1 Tax=Burkholderia sp. JS667 RepID=C3UVD3_9BURK
4-oxalocrotonate tautomerase
scnpilot_p_inoc_scaffold_2565_2
Comamonas sp. JS765, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..1548)
DNA (789bp) protein (263aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
4-oxalocrotonate decarboxylase n=1 Tax=Comamonas sp. JS765 RepID=Q9F9I2_9BURK rbh
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:AAG17138.1}; TaxID=58226 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. JS7
scnpilot_p_inoc_scaffold_2565_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1591..2835)
DNA (1245bp) protein (415aa)
Putative substrate-binding component of ABC transporter n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7V3_9RHIZ
ABC transporter {ECO:0000313|EMBL:GAN77935.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifacie
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_2565_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2832..4166)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036019D4
aerotaxis receptor Aer rbh
Aerotaxis receptor Aer {ECO:0000313|EMBL:CDM23332.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella def
scnpilot_p_inoc_scaffold_2565_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4182..5210)
DNA (1029bp) protein (343aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39) rbh
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:00002
4-hydroxy-2-oxovalerate aldolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUP0_ALIDB rbh
scnpilot_p_inoc_scaffold_2565_6
Diaphorobacter sp. J5-51, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5225..6133)
DNA (909bp) protein (303aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=1 Tax=Diaphorobacter sp. J5-51 RepID=K4K4B5_9BURK rbh
scnpilot_p_inoc_scaffold_2565_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6155..6781)
DNA (627bp) protein (209aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479G8_DECAR
Short-chain dehydrogenase/reductase SDR
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_p_inoc_scaffold_2565_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6793..7575)
DNA (783bp) protein (261aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-oxopent-4-enoate hydratase {ECO:0000313|EMBL:AEB82710.1}; EC=4.2.1.80 {ECO:0000313|EMBL:AEB82710.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
2-oxopent-4-enoate hydratase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN8_ALIDB rbh
scnpilot_p_inoc_scaffold_2565_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7689..9149)
DNA (1461bp) protein (487aa)
2-hydroxymuconic semialdehyde dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUN6_ALIDB rbh
2-hydroxymuconic semialdehyde dehydrogenase
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:GAO21634.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
scnpilot_p_inoc_scaffold_2565_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9345..10229)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEJ2_ALIDK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB82707.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_2565_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10242..10673)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB82706.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_2565_12

Not on your lists

comp(10673..11599)
DNA (927bp) protein (309aa)
catechol 2,3 dioxygenase (EC:1.13.11.2)
Catechol 2,3-dioxygenase n=1 Tax=uncultured bacterium RepID=C6KUJ4_9BACT rbh
Catechol 2,3-dioxygenase {ECO:0000313|EMBL:BAH89647.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_2565_13
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11626..11961)
DNA (336bp) protein (112aa)
Plant-type ferredoxin n=1 Tax=Pseudomonas putida RepID=Q93JX0_PSEPU
Plant-type ferredoxin {ECO:0000313|EMBL:BAB62049.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Art
ferredoxin
scnpilot_p_inoc_scaffold_2565_14
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12112..12729)
DNA (618bp) protein (206aa)
AfpU n=1 Tax=Alcaligenes faecalis RepID=A8CYC3_ALCFA rbh
AfpU {ECO:0000313|EMBL:ABV30926.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2565_15
Diaphorobacter sp. J5-51, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12856..13032
DNA (177bp) protein (59aa)
PyrR2 n=1 Tax=Diaphorobacter sp. J5-51 RepID=K4K1S4_9BURK
LysR family transcriptional regulator
PyrR2 {ECO:0000313|EMBL:AFU93042.1}; TaxID=680496 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source="Diaphorobacter sp. J5-51.;"
scnpilot_p_inoc_scaffold_2565_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13047..13643
DNA (597bp) protein (199aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2J5_ACISJ
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM40470.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_2565_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13665..14735)
DNA (1071bp) protein (357aa)
phenol 2-monooxygenase (EC:1.14.13.7)
Oxidoreductase FAD-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN1_ALIDB rbh
Ferredoxin:oxidoreductase FAD/NAD(P)-binding subunit {ECO:0000313|EMBL:GAO21639.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus
scnpilot_p_inoc_scaffold_2565_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14897..15253)
DNA (357bp) protein (119aa)
Phenol hydroxylase conserved region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN0_ALIDB
phenol hydroxylase
Phenol hydroxylase conserved region {ECO:0000313|EMBL:AEB82702.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
scnpilot_p_inoc_scaffold_2565_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15270..16817)
DNA (1548bp) protein (516aa)
Phenol 2-monooxygenase {ECO:0000313|EMBL:AEB82701.1}; EC=1.14.13.7 {ECO:0000313|EMBL:AEB82701.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEI6_ALIDK rbh
scnpilot_p_inoc_scaffold_2565_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16844..17113)
DNA (270bp) protein (90aa)
Monooxygenase component MmoB/DmpM n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM8_ALIDB
monooxygenase component mmob/dmpm
Monooxygenase component MmoB/DmpM {ECO:0000313|EMBL:GAO21642.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycl
scnpilot_p_inoc_scaffold_2565_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17130..18122)
DNA (993bp) protein (331aa)
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase {ECO:0000313|EMBL:AEB82699.1}; EC=1.14.13.7 {ECO:0000313|EMBL:AEB82699.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Phenol 2-monooxygenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEI4_ALIDK rbh
scnpilot_p_inoc_scaffold_2565_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18161..18460)
DNA (300bp) protein (100aa)
Phenol hydroxylase subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM6_ALIDB
phenol hydroxylase subunit
Phenol hydroxylase subunit {ECO:0000313|EMBL:GAO21644.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
scnpilot_p_inoc_scaffold_2565_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18746..20455
DNA (1710bp) protein (570aa)
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM5_ALIDB rbh
Fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:GAO21645.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphil
sigma-54 factor interaction domain-containing protein
scnpilot_p_inoc_scaffold_2565_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20456..21187
DNA (732bp) protein (244aa)
Regulatory protein GntR HTH n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUM4_ALIDB rbh
GntR family transcriptional regulator
Regulatory protein GntR HTH {ECO:0000313|EMBL:ADU98100.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sou
scnpilot_p_inoc_scaffold_2565_25
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21239..21970)
DNA (732bp) protein (244aa)
peptidase M48 n=1 Tax=Acidovorax avenae RepID=UPI000360E203
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABM30887.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
peptidase m48 ste24p
scnpilot_p_inoc_scaffold_2565_26
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22018..22956)
DNA (939bp) protein (313aa)
DME family drug/metabolite transporter n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFY0_DELAC rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF87378.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sourc
scnpilot_p_inoc_scaffold_2565_27
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23037..25238)
DNA (2202bp) protein (734aa)
TonB-dependent siderophore receptor n=1 Tax=Acidovorax sp. CF316 RepID=J1EK00_9BURK
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJE52606.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
TonB-dependent siderophore receptor
scnpilot_p_inoc_scaffold_2565_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25276..25485)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U911_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE52607.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
hypothetical protein
scnpilot_p_inoc_scaffold_2565_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25482..25958)
DNA (477bp) protein (159aa)
peptidase n=1 Tax=Chitiniphilus shinanonensis RepID=UPI0003712A5D
PepSY-associated TM helix domain-containing protein
pepsy-associated tm helix domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_2565_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25991..26674
DNA (684bp) protein (228aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG08330.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
Displaying items 1-30 of 39 in total

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