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scnpilot_p_inoc_scaffold_2612

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2612_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..983)
DNA (981bp) protein (327aa)
chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EDF
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJE50364.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_2612_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..2160)
DNA (1053bp) protein (351aa)
DNA polymerase III, delta subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH65_ACIET rbh
holA; DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ACM34693.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax e
scnpilot_p_inoc_scaffold_2612_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2215..2727)
DNA (513bp) protein (171aa)
rare lipoprotein B id=12550772 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rare lipoprotein B Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
rare lipoprotein B
scnpilot_p_inoc_scaffold_2612_4
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2728..5433)
DNA (2706bp) protein (902aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1457173 species="Bacteria; Proteo
leucyl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003748B41
leuS; leucyl-tRNA synthetase
scnpilot_p_inoc_scaffold_2612_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5752..7014
DNA (1263bp) protein (421aa)
MscS Mechanosensitive ion channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TW42_ALIDB
mscs mechanosensitive ion channel
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEB86769.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
scnpilot_p_inoc_scaffold_2612_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7119..7811)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E1FF7 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23384.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
peptidase S24/S26A/S26B, conserved region
scnpilot_p_inoc_scaffold_2612_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8000..10549
DNA (2550bp) protein (850aa)
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW46_ALIDB rbh
Diguanylate cyclase {ECO:0000313|EMBL:ADV01820.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
diguanylate cyclase
scnpilot_p_inoc_scaffold_2612_8
unknown

Not on your lists

comp(10566..11030)
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2612_9
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11358..11921)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TG79_9BURK
Uncharacterised protein {ECO:0000313|EMBL:CRD94243.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2612_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12110..13657
DNA (1548bp) protein (516aa)
Aerotaxis sensor receptor transmembrane protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G8Y6_RALS8 rbh
aer; aerotaxis sensor receptor transmembrane protein
Aerotaxis sensor receptor transmembrane protein {ECO:0000313|EMBL:AEG71426.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sour
scnpilot_p_inoc_scaffold_2612_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13710..14156)
DNA (447bp) protein (149aa)
Biopolymer transport protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U3G9_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EJE50667.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_2612_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14153..14380)
DNA (228bp) protein (76aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTV6_POLNA
mota/tolq/exbb proton channel Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_2612_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14377..14853)
DNA (477bp) protein (159aa)
Mota/tolq/exbb proton channel n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6G3_9BURK
mota/tolq/exbb proton channel
Mota/tolq/exbb proton channel {ECO:0000313|EMBL:AFU48180.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. K
scnpilot_p_inoc_scaffold_2612_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15022..15852)
DNA (831bp) protein (277aa)
dihydrodipicolinate reductase-like Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
dihydrodipicolinate reductase-like id=12550776 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
dihydrodipicolinate reductase
scnpilot_p_inoc_scaffold_2612_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15907..16461)
DNA (555bp) protein (185aa)
membrane protein SmpA n=1 Tax=Acidovorax radicis RepID=UPI0002378693
SmpA/OmlA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SmpA/OmlA domain-containing protein
scnpilot_p_inoc_scaffold_2612_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16512..16973
DNA (462bp) protein (154aa)
Ferric uptake regulator, Fur family n=2 Tax=Acidovorax RepID=A1WCQ5_ACISJ
ferric uptake regulator family protein
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABM44030.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_2612_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16981..17937)
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUX9_9BURK
HPr kinase/phosphorylase
scnpilot_p_inoc_scaffold_2612_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17954..18454)
DNA (501bp) protein (167aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6G5_9BURK
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Displaying 18 items

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