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scnpilot_p_inoc_scaffold_1285_5

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 2603..3424

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase I alpha (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 275.0
  • Bit_score: 347
  • Evalue 2.50e-93
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036A2392 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 275.0
  • Bit_score: 360
  • Evalue 1.70e-96
  • rbh
Shikimate dehydrogenase {ECO:0000313|EMBL:KDP84575.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 275.0
  • Bit_score: 349
  • Evalue 3.30e-93

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGCAGATCGATGGCAAGACCCGGCTCGTCGGCATCGTGGCCGACCCCATCGCCCACGTGCGCACGCCGCAGCTCTTCAACGCCGCCGCCGCCCAGCAGGGGCTGAACGCCGTGTGCGTGCCGCTGCACGCGGCGCCCGCGCACCTGCCGCAGCTGCTGGCGGGGCTGGCCGGCTGCCAGAATCTGGCCGGGCTGGTCGTCACCATCCCGCACAAGGAGGCCGTGACCGCGCATTGCGGTGAACTGACCCCGGCGGCGCGCCTGGTGGGCGCCGCCAACGTGCTGCGCTGGGATGCCGCGCGGGGCCACTGGGTGGGCGGCAACCTCGACGGCGACGGCTTCGTCGCCGGGCTGAAGGAGCGCGGGCACACCCTGGCGGGCCAGCGCGTGCTGCTGCTGGGCGCGGGCGGCGCGGGTAAGGCCATCGCCTACGCCGTGGGGCGCGAGCGGCCGGCCGCGCTGGTGCTGAGCAACCGCTCCATGGCGCGCGCCGAGGAAGCCGTGCAGCGCCTGGCCCCGGCGCTGCCGGGCGTGGACGTGCGCACCGGCACGGCCGACGCCACGGGCTTCGACGTGGTCATCAACGCCACCGCCCTGGGCCTGCACGACGGCGACCCGGCGCCGCTGCCCACCGATACCCTGCAGCCCGGCACCCTGGTGTGCGAGGCCGTGATGCGCGACACCGCCTTGCTCGCCGCCGCGCGTGCACGCGGCGCCACGGCCCACCCGGGGCACGGCATGCTGTACGGGCAGATGGTGGAAATCGCCCGCTTCTTCGGCCTGGCCATTGCACCGGGCAACGTGCCGCGCCTGTTCGGCTGA
PROTEIN sequence
Length: 274
MQIDGKTRLVGIVADPIAHVRTPQLFNAAAAQQGLNAVCVPLHAAPAHLPQLLAGLAGCQNLAGLVVTIPHKEAVTAHCGELTPAARLVGAANVLRWDAARGHWVGGNLDGDGFVAGLKERGHTLAGQRVLLLGAGGAGKAIAYAVGRERPAALVLSNRSMARAEEAVQRLAPALPGVDVRTGTADATGFDVVINATALGLHDGDPAPLPTDTLQPGTLVCEAVMRDTALLAAARARGATAHPGHGMLYGQMVEIARFFGLAIAPGNVPRLFG*