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scnpilot_p_inoc_scaffold_1285

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1285_1
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..504
DNA (504bp) protein (168aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkhold
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC:1.8.1.4)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00035F8C48
scnpilot_p_inoc_scaffold_1285_2
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

519..962
DNA (444bp) protein (148aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Cupriavidus sp. WS RepID=UPI00036744B2
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KDP84573.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
scnpilot_p_inoc_scaffold_1285_3
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

925..1128
DNA (204bp) protein (68aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XHM4_9RALS
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EON18791.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.
scnpilot_p_inoc_scaffold_1285_4
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1142..2599
DNA (1458bp) protein (486aa)
Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KDP84574.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KDP84574.1};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bu
succinate-semialdehyde dehdyrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036A768E rbh
scnpilot_p_inoc_scaffold_1285_5
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2603..3424
DNA (822bp) protein (274aa)
Shikimate 5-dehydrogenase I alpha (EC:1.1.1.25)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036A2392 rbh
Shikimate dehydrogenase {ECO:0000313|EMBL:KDP84575.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
scnpilot_p_inoc_scaffold_1285_6
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3516..5579)
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031D761B
clostripain family protein
Peptidase C11 clostripain {ECO:0000313|EMBL:ACR31688.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glu
scnpilot_p_inoc_scaffold_1285_7
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(5636..7480)
DNA (1845bp) protein (615aa)
TAP domain protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UA72_DEIML rbh
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:ADV67961.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strai
scnpilot_p_inoc_scaffold_1285_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7518..9290)
DNA (1773bp) protein (591aa)
UPI00039C980D related cluster n=1 Tax=unknown RepID=UPI00039C980D
Uncharacterized protein {ECO:0000313|EMBL:GAD24693.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
cell surface receptor IPT/TIG domain-containing protein
scnpilot_p_inoc_scaffold_1285_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9582..10265
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CF9E4 rbh
Response regulator {ECO:0000313|EMBL:GAD24722.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
response regulator 18
scnpilot_p_inoc_scaffold_1285_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10265..12205
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003782171 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24719.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
periplasmic sensor signal transduction histidine kinase 3
scnpilot_p_inoc_scaffold_1285_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12240..12806)
DNA (567bp) protein (189aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12550446 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_1285_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12803..13438)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TV17_ALIDB
hypothetical protein
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AEB84032.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphil
scnpilot_p_inoc_scaffold_1285_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13440..13613)
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWF7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23300.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
scnpilot_p_inoc_scaffold_1285_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13594..14244)
DNA (651bp) protein (217aa)
Cytochrome c class I n=2 Tax=Alicycliphilus denitrificans RepID=E8TV16_ALIDB
cytochrome c class i Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cytochrome c class I
scnpilot_p_inoc_scaffold_1285_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14241..14828)
DNA (588bp) protein (196aa)
cytochrome c oxidase, mono-heme subunit/FixO; K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cytochrome c oxidase, mono-heme subunit/FixO; K00405 cytochrome c oxidase cbb3-type subunit II id=12550443 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome c oxidase mono-heme subunit/fixo
scnpilot_p_inoc_scaffold_1285_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14818..16467)
DNA (1650bp) protein (550aa)
cytochrome-c oxidase (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] id=12550442 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cytochrome-c oxidase (EC:1.9.3.1)
scnpilot_p_inoc_scaffold_1285_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16708..18162
DNA (1455bp) protein (485aa)
transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D6C8F rbh
Outer membrane efflux protein {ECO:0000313|EMBL:GAD20988.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
outer membrane efflux protein
scnpilot_p_inoc_scaffold_1285_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18159..19157
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EA2E5 rbh
Membrane-fusion protein {ECO:0000313|EMBL:GAD20989.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
secretion protein HlyD family protein
scnpilot_p_inoc_scaffold_1285_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19154..20329
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003811F8E rbh
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:GAD20990.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
ABC transporter
scnpilot_p_inoc_scaffold_1285_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20423..21547
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368AF10 rbh
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:GAD20991.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
ABC transporter
scnpilot_p_inoc_scaffold_1285_21
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21554..22633)
DNA (1080bp) protein (360aa)
putative acetyl esterase (EC:3.1.1.6) rbh
Putative acetyl esterase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZXS8_9RHOO rbh
Putative acetyl esterase {ECO:0000313|EMBL:ENO99158.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P
scnpilot_p_inoc_scaffold_1285_22
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22709..23578
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZXE3_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO99157.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein rbh
scnpilot_p_inoc_scaffold_1285_23
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(23539..24057)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIT7_THET1
hypothetical protein
Tax=BJP_IG2069_Anaerolineales_43_63
scnpilot_p_inoc_scaffold_1285_24
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24376..24822)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003682B37
Uncharacterized protein {ECO:0000313|EMBL:EJZ35735.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_p_inoc_scaffold_1285_25
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24980..25120)
DNA (141bp) protein (47aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TM97_ACIAC
proX; glycine betaine transporter periplasmic subunit
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ABM32085.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Displaying 25 items

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