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scnpilot_p_inoc_scaffold_1604_7

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6271..6786)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7T9_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 168.0
  • Bit_score: 179
  • Evalue 2.60e-42
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EZP39931.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 169.0
  • Bit_score: 193
  • Evalue 1.90e-46
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 155.0
  • Bit_score: 178
  • Evalue 1.60e-42

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCGCCCCTGCCGCCCGCCCAGCGCCCGCTGGCCGCCGCCTTCTTCGCCGAGCACCAGCCCTGGCTGCTGGGCCGGCTGCACCAGCGCCTGCGCAACCGCGCCGATGCCGAAGACCTCGCCTCCGAGACCTTCGTGCGCGTGGTCGCCCAGCCCGACCTGGCGGCGGTGGGCACGCCGCGCGCCTTCGTCGCCTCCCTCGCCAAGCGCGTGCTGTTCGACTTCTGGCGCCGCCGCGACCTGGAGCGCGCCTACCTCGACGCCATCGCCCACCTGCCCGAGGCGCTCGCGCCCTCGCCCGAGGAGCGCGCGCTGCTGCTCGAATCGCTGGAAGGCATCGCCCGCGCGCTCGACGGCCTGCCCGACAAGGCGCGCCGCGCCTTCCTCATGAGCCAGCTCGACGAACGCACCTACGCCGAGATCGCCACGCGCCTGGACGTGTCGGCCAGCATGGTGCGCAAATACATGGTGCAAGGCTGGCAGGCCTGCGCCCAGGCCCTGGCGGAACCGGCATGA
PROTEIN sequence
Length: 172
MPPLPPAQRPLAAAFFAEHQPWLLGRLHQRLRNRADAEDLASETFVRVVAQPDLAAVGTPRAFVASLAKRVLFDFWRRRDLERAYLDAIAHLPEALAPSPEERALLLESLEGIARALDGLPDKARRAFLMSQLDERTYAEIATRLDVSASMVRKYMVQGWQACAQALAEPA*