ggKbase home page

scnpilot_p_inoc_scaffold_1604

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1604_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
Putative transcriptional regulator n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLZ1_ACIAC
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADX45345.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_1604_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

399..1613
DNA (1215bp) protein (405aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
L-carnitine dehydratase/bile acid-inducible protein F id=12552318 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
l-carnitine dehydratase/bile acid-inducible protein f
scnpilot_p_inoc_scaffold_1604_3
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1682..4138)
DNA (2457bp) protein (819aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039568C4 rbh
TonB-dependent siderophore receptor
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83027.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
scnpilot_p_inoc_scaffold_1604_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4427..4726)
DNA (300bp) protein (100aa)
XRE family plasmid maintenance system antidote protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003658FDE
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:GAD20520.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_1604_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4768..5049)
DNA (282bp) protein (94aa)
Plasmid maintenance system killer n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AKU7_DELSC
plasmid maintenance system killer protein
Plasmid maintenance system killer {ECO:0000313|EMBL:AEF87309.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (st
scnpilot_p_inoc_scaffold_1604_6
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5288..6274)
DNA (987bp) protein (329aa)
Anti-FecI sigma factor FecR n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z8H5_9RHOO rbh
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:ENO90663.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_1604_7
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6271..6786)
DNA (516bp) protein (172aa)
ECF subfamily RNA polymerase sigma factor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7T9_9RHOO
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EZP39931.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;"
ECF subfamily RNA polymerase sigma-24 factor
scnpilot_p_inoc_scaffold_1604_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7002..7640
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WP76_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD39935.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
PepSY-associated TM helix domain-containing protein
scnpilot_p_inoc_scaffold_1604_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7654..8193
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XJU4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD46714.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_1604_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8238..9056
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2X9A0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD46715.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_1604_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9092..10132
DNA (1041bp) protein (347aa)
Thiamine biosynthesis lipoprotein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X4A9_DELAC rbh
Thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:EPD39932.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovo
ApbE family lipoprotein
scnpilot_p_inoc_scaffold_1604_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10129..11508
DNA (1380bp) protein (460aa)
oxidoreductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003821857 rbh
Sulfite reductase, alpha subunit {ECO:0000313|EMBL:GAD21029.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
flavodoxin/nitric oxide synthase
scnpilot_p_inoc_scaffold_1604_13
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11808..13961
DNA (2154bp) protein (718aa)
Outer membrane receptor for ferrienterochelin and colicin n=1 Tax=Acidovorax sp. CF316 RepID=J1EDX6_9BURK rbh
Outer membrane receptor for ferrienterochelin and colicin {ECO:0000313|EMBL:EJE50536.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
TonB-dependent receptor
scnpilot_p_inoc_scaffold_1604_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14187..14627
DNA (441bp) protein (147aa)
Putative MerR family transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z649_9RHOO
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CDM25482.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
scnpilot_p_inoc_scaffold_1604_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14590..14973
DNA (384bp) protein (128aa)
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:CDM25481.1}; EC=4.1.1.44 {ECO:0000313|EMBL:CDM25481.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
Putative 4-carboxymuconolactone decarboxylase n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UG68_ADVKW
scnpilot_p_inoc_scaffold_1604_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15211..16143)
DNA (933bp) protein (311aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
2-dehydropantoate 2-reductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAI9_ACISJ rbh
scnpilot_p_inoc_scaffold_1604_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16228..16773)
DNA (546bp) protein (182aa)
Acetyltransferase n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CSF8_PSEST
GCN5 family acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:KIL04513.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stu
scnpilot_p_inoc_scaffold_1604_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16785..17465)
DNA (681bp) protein (227aa)
Methyladenine glycosylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI9_ALIDB rbh
methyladenine glycosylase
Methyladenine glycosylase {ECO:0000313|EMBL:ADU99090.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus d
scnpilot_p_inoc_scaffold_1604_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17480..17785)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE68_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86030.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_p_inoc_scaffold_1604_20
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18049..18432)
DNA (384bp) protein (128aa)
RNA polymerase sigma factor RpoD n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q295_ACIAP
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
Displaying 20 items

View Taxonomy