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scnpilot_p_inoc_scaffold_1865_23

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(22105..22626)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYG3_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 264
  • Evalue 8.20e-68
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 264
  • Evalue 2.30e-68
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD37004.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 170.0
  • Bit_score: 264
  • Evalue 1.10e-67

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGACCCACACAGAATTCGCGCTGCAGCAAAGGATCGAGGCCCTCTACACCGACCACCACGGCTGGCTGCGGGGCTGGCTGCGCCGCAAGCTCGGCAACGCCTGCGACGCGGCCGACCTGGCGCACGACACCTACCTGCGCATCCTGCGCACCGGCCAGGTGCCGCAGGCGCAGCAGTCGCGCCAGCACCTGGCCCAGATCGCCAATGGCCTGGTGATCGACCTGCACCGCCGGCGGCACATCGAATCGGCCTATCTGCAGGCCCTGGCGCTGCTGCCCGAGCCCCTGGCGCCGTCGGAGGAAGAGCGCGCCCTGGCCATCGAGGCGCTGATCCAGATCGACGCCATCCTGCACGGCCTGCCCGCCAAGGCCCGCGAAGCCCTGTTGCTGTGCAAGCTCGACGGCATGGGCTACCGCGACATCGCCGCCCGGCTCGGCGTATCGGTGTCGTCGGTGGAGAAATACATCGCCGCCGCCCTGGTGGCCTGCCACCAGGCGCTGCACGCCACGCCGGCACGCTGA
PROTEIN sequence
Length: 174
MTHTEFALQQRIEALYTDHHGWLRGWLRRKLGNACDAADLAHDTYLRILRTGQVPQAQQSRQHLAQIANGLVIDLHRRRHIESAYLQALALLPEPLAPSEEERALAIEALIQIDAILHGLPAKAREALLLCKLDGMGYRDIAARLGVSVSSVEKYIAAALVACHQALHATPAR*