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scnpilot_p_inoc_scaffold_1865

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1865_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..902)
DNA (900bp) protein (300aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380D7E5
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD24178.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
scnpilot_p_inoc_scaffold_1865_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(997..1824)
DNA (828bp) protein (276aa)
short-chain dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C7332 rbh
Dehydrogenase {ECO:0000313|EMBL:GAD24177.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
short-chain dehydrogenase/reductase sdr
scnpilot_p_inoc_scaffold_1865_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1894..2598)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7DA3 rbh
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:GAD24176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
pseudouridine synthase
scnpilot_p_inoc_scaffold_1865_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2585..4753)
DNA (2169bp) protein (723aa)
PAS/PAC sensor hybrid histidine kinase id=12550291 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
signal transduction histidine kinase, nitrogen specific, ntrb
scnpilot_p_inoc_scaffold_1865_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4895..5683
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003672C2F rbh
Predicted alpha/beta hydrolase superfamily {ECO:0000313|EMBL:GAD22031.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
alpha/beta hydrolase fold protein rbh
scnpilot_p_inoc_scaffold_1865_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..6937)
DNA (1152bp) protein (384aa)
aminotransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BAB6 rbh
Kynurenine--oxoglutarate transaminase {ECO:0000313|EMBL:GAD22033.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
aminotransferase
scnpilot_p_inoc_scaffold_1865_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6934..7875)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ40_ACIET rbh
CysB family transcriptional regulator-like protein
CysB family transcriptional regulator-like protein {ECO:0000313|EMBL:GAD22034.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
scnpilot_p_inoc_scaffold_1865_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7918..8286)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KFB2_9BURK
cobalamin (vitamin B12) biosynthesis CbiX protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
cobalamin (vitamin B12) biosynthesis CbiX protein
scnpilot_p_inoc_scaffold_1865_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..9395)
DNA (1110bp) protein (370aa)
Permease n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXN5_9BURK
permease Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
permease
scnpilot_p_inoc_scaffold_1865_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9392..10495)
DNA (1104bp) protein (368aa)
permease n=1 Tax=Acidovorax radicis RepID=UPI000237512F
permease Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
permease
scnpilot_p_inoc_scaffold_1865_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10540..12042
DNA (1503bp) protein (501aa)
Leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Acidovorax sp. CF316 RepID=J0K8J9_9BURK
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1144317 spec
scnpilot_p_inoc_scaffold_1865_12
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12051..12485
DNA (435bp) protein (145aa)
DNA polymerase III, chi subunit n=1 Tax=Acidovorax sp. CF316 RepID=J1ECD0_9BURK
DNA polymerase III, chi subunit {ECO:0000313|EMBL:EJE49919.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
DNA polymerase III chi subunit, HolC
scnpilot_p_inoc_scaffold_1865_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12647..12865
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W778_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42103.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_p_inoc_scaffold_1865_14
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12875..13882)
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW36_9BURK
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EHL23415.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="
d-isomer specific 2-hydroxyacid dehydrogenase
scnpilot_p_inoc_scaffold_1865_15
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13983..14189)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129C3_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE44869.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
scnpilot_p_inoc_scaffold_1865_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14313..14987)
DNA (675bp) protein (225aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=1144317 species="Bacteria; Proteo
LexA repressor n=1 Tax=Acidovorax sp. CF316 RepID=J1ECC2_9BURK
SOS-response transcriptional repressor, LexA
scnpilot_p_inoc_scaffold_1865_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15073..16029
DNA (957bp) protein (319aa)
asparaginase (EC:3.5.1.1)
Asparaginase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0M3_9BURK
Asparaginase {ECO:0000313|EMBL:EHL21854.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
scnpilot_p_inoc_scaffold_1865_18
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16159..16467)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5ITM2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ERI34976.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-
hypothetical protein
scnpilot_p_inoc_scaffold_1865_19
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16464..16766)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XPX4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO81395.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1865_20
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16763..18340)
DNA (1578bp) protein (526aa)
PepSY-associated TM helix domain-containing protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7C1_9RHOO
PepSY-associated TM helix domain-containing protein {ECO:0000313|EMBL:ENO90447.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source
PepSY-associated TM helix domain-containing protein
scnpilot_p_inoc_scaffold_1865_21
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18398..20926)
DNA (2529bp) protein (843aa)
TonB-dependent siderophore receptor n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XF58_METNJ rbh
TonB-dependent siderophore receptor
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83027.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
scnpilot_p_inoc_scaffold_1865_22
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21079..22098)
DNA (1020bp) protein (340aa)
FecR family protein 27 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJK9_ACHXA rbh
FecR family protein
FecR family protein 27 {ECO:0000313|EMBL:ADP19241.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xyloso
scnpilot_p_inoc_scaffold_1865_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22105..22626)
DNA (522bp) protein (174aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYG3_DELSC
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD37004.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del
scnpilot_p_inoc_scaffold_1865_24
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22770..23426)
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=3 Tax=Comamonas testosteroni RepID=D0IZX7_COMT2 rbh
adenylate kinase
scnpilot_p_inoc_scaffold_1865_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23617..24417)
DNA (801bp) protein (267aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T697_ACIDE
scnpilot_p_inoc_scaffold_1865_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24414..24596)
DNA (183bp) protein (61aa)
UPF0434 protein Dtpsy_1553 n=2 Tax=Acidovorax RepID=Y1553_ACIET
hypothetical protein
hypothetical protein; K09791 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1865_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24621..25610)
DNA (990bp) protein (330aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
tetraacyldisaccharide 4''''-kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A9DC4 rbh
scnpilot_p_inoc_scaffold_1865_28
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25617..26042)
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQA0_ACIAC
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABM33138.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_1865_29
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26039..26671)
DNA (633bp) protein (211aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2A6_ACIAP
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ADX46554.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avena
scnpilot_p_inoc_scaffold_1865_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27015..28349
DNA (1335bp) protein (445aa)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZF1_9BURK
exodeoxyribonuclease VII large subunit
exodeoxyribonuclease VII large subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 31 in total

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