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scnpilot_p_inoc_scaffold_2115_26

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(29304..29672)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2W6_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 122.0
  • Bit_score: 156
  • Evalue 1.70e-35
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY {ECO:0000313|EMBL:KIM00308.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiril similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 121.0
  • Bit_score: 159
  • Evalue 3.70e-36
response regulator similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 122.0
  • Bit_score: 156
  • Evalue 4.80e-36

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Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGAAGGTACTGGTGGTGGACGATGACGCGCTGGCGGGCGAGATGACCGCCGCGGTGCTCGAAGGCATGGGCCATGAGGCCGTGCTGGCCGAGGATGGCGTGGACGCCGCGGGCCGTCTCAACGCCGACGGCGCCATCGCGCTCGTCATCAGCGACATGAACATGCCCCTGGTCAGCGGCATCGACCTGTTCCGCGAGCTGCGCGCGCAGGGCTGCCTGCTGCCGTTCATCCTGCTCACCGGCGACGAGCCCGCCGGCCTGCTGGCCCGGGAGCCGCGCCTGGATGCCTGCCTGGCCAAGGATTTCACGCTGGAAGAGCGCCTGCCTTCCCTCATCGGCGAGGTGATGGCACGCCACGCAAAAGGTTGA
PROTEIN sequence
Length: 123
MKVLVVDDDALAGEMTAAVLEGMGHEAVLAEDGVDAAGRLNADGAIALVISDMNMPLVSGIDLFRELRAQGCLLPFILLTGDEPAGLLAREPRLDACLAKDFTLEERLPSLIGEVMARHAKG*