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scnpilot_p_inoc_scaffold_2115

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2115_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..3078)
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XL60_DELAC rbh
fibronectin type III domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EPD40324.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
scnpilot_p_inoc_scaffold_2115_2
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3232..3987
DNA (756bp) protein (252aa)
Probable septum site-determining protein MinC n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TIE8_ACIAC
septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_p_inoc_scaffold_2115_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4029..4844
DNA (816bp) protein (272aa)
Site-determining protein n=2 Tax=Acidovorax RepID=A1W246_ACISJ rbh
septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (
scnpilot_p_inoc_scaffold_2115_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4851..5117
DNA (267bp) protein (89aa)
cell division topological specificity factor MinE n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035ED91F
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
cell division topological specificity factor mine
scnpilot_p_inoc_scaffold_2115_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5239..7365
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B30E31
hypothetical protein
PE family protein {ECO:0000313|EMBL:AIY18463.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex)
scnpilot_p_inoc_scaffold_2115_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7453..8451)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00037D19C1
putative AraC-family transcriptional regulator Tax=GWA2_Burkholderiales_64_37_curated
DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_2115_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..8966)
DNA (483bp) protein (161aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MA03_ACIET
flavin reductase domain-containing protein
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:ACM31574.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
scnpilot_p_inoc_scaffold_2115_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9016..10038
DNA (1023bp) protein (341aa)
Putative carboxypeptidase (Fragment) n=1 Tax=Acidovorax sp. CF316 RepID=J0K214_9BURK rbh
peptidase M14, carboxypeptidase A Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
peptidase M14, carboxypeptidase A
scnpilot_p_inoc_scaffold_2115_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10153..11649
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PE75_CELJU
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2115_10
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11687..12919
DNA (1233bp) protein (411aa)
ATPase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F20965 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ84803.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. K
scnpilot_p_inoc_scaffold_2115_11
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12922..13578
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035C73AD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEM59604.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestri
hypothetical protein
scnpilot_p_inoc_scaffold_2115_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13686..14396
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YVH9_9ALTE
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2115_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14393..17683
DNA (3291bp) protein (1097aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003608B2A rbh
ATP synthase, Delta/Epsilon chain, long alpha-helix domain Tax=GWA2_Burkholderiales_64_37_curated
ATP synthase, Delta/Epsilon chain, long alpha-helix domain-containing protein
scnpilot_p_inoc_scaffold_2115_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17795..18964
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YVH7_9ALTE rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2115_15
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19318..19947
DNA (630bp) protein (210aa)
Secretion protein HlyD n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H4Z8_METFK
secretion protein HlyD; K01993 HlyD family secretion protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
secretion protein HlyD
scnpilot_p_inoc_scaffold_2115_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19954..22578
DNA (2625bp) protein (875aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NEE3_9GAMM
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG89180.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
ABC-type multidrug transport system, ATPase component
scnpilot_p_inoc_scaffold_2115_17
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22585..23712
DNA (1128bp) protein (376aa)
ABC transporter; K09686 antibiotic transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
ABC transporter
ABC transporter; K09686 antibiotic transport system permease protein id=12494313 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_2115_18
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23817..24749)
DNA (933bp) protein (311aa)
transporter n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B075A rbh
Transporter {ECO:0000313|EMBL:KDV26570.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_2115_19
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24808..25218
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TI37_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM30625.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
scnpilot_p_inoc_scaffold_2115_20
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25260..25916
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036AFDBA rbh
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EON18021.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia
scnpilot_p_inoc_scaffold_2115_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25966..26259)
DNA (294bp) protein (98aa)
Acylphosphatase; EC=3.6.1.7;; Acylphosphate phosphohydrolase; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
Acylphosphatase n=1 Tax=Acidovorax sp. (strain JS42) RepID=ACYP_ACISJ
acylphosphatase
scnpilot_p_inoc_scaffold_2115_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26347..26580
DNA (234bp) protein (78aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7U8_ACIDE
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EER59444.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
4Fe-4S ferredoxin
scnpilot_p_inoc_scaffold_2115_23
unknown

Not on your lists

comp(26631..27050)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2115_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27066..27584)
DNA (519bp) protein (173aa)
Putative chemotaxis protein CheW n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8G0_9PROT
putative chemotaxis protein CheW
Putative chemotaxis protein CheW {ECO:0000313|EMBL:CDL00938.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="M
scnpilot_p_inoc_scaffold_2115_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27581..29299)
DNA (1719bp) protein (573aa)
putative Response regulator PleD [Includes: Diguanylate cyclase] (EC:2.7.7.65)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVP8_9PROT rbh
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:CAM74705.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
scnpilot_p_inoc_scaffold_2115_26
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29304..29672)
DNA (369bp) protein (123aa)
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2W6_MAGSA
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY {ECO:0000313|EMBL:KIM00308.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiril
response regulator
scnpilot_p_inoc_scaffold_2115_27
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29697..31478)
DNA (1782bp) protein (594aa)
Gliding motility regulatory protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2W7_MAGSA
gliding motility regulatory protein
Gliding motility regulatory protein {ECO:0000313|EMBL:BAE51808.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source=
Displaying 27 items

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