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scnpilot_p_inoc_scaffold_147_82

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 91890..92459

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Acidovorax radicis RepID=UPI0002375C18 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 189.0
  • Bit_score: 365
  • Evalue 2.90e-98
  • rbh
rimM; 16S rRNA-processing protein RimM Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 189.0
  • Bit_score: 377
  • Evalue 1.00e-101
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 190.0
  • Bit_score: 342
  • Evalue 9.50e-92

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCCACCAACCTGTCCCTCGAACCCGCAGAGCTGCCCACAGACGCCGTTGAAGTGGGGCGCATTGCCGATGCCTGGGGTGTCAAGGGCTGGTTCAAGGTCCTGTCGCACAGCAGCAGCCCTGAGGCGCTGTTTTCGTCCAAACGCTGGTACCTGCAGCCTTCCGAGCGCGGCGCCAAGACCTTTGCGGGCACCGTTTTGCTGTCCATCCGCCAGGCCAAGGACCATTCGGACACCGTGGTTGCCTGGGCGCAGGGCATTGATGACCGCGATGCCGCCGAAGCCTTGCGCGGTGCGCGCATCTTTGTGCCGCGCTCCAGCTTTCCGTCCACCACGGAGGGCGAGTACTACTGGATCGATCTGATCGGTCTTGCGGTCGTCAACCGCGAAGGTGTGGCGCTGGGGCGGGTGCAGGAATTGATGTCCACCGGTCCGCAGACGGTGCTGGTGTTGACTTATGAGCAGGACGGCAAGGCACAGGAGCGGATGATCCCTTTTGTCTCGGCCTTCATTGACAACGTGGACTTGGCCGAAAAGCGCATCACGGTGGACTGGCAGCCGGACTACTGA
PROTEIN sequence
Length: 190
MATNLSLEPAELPTDAVEVGRIADAWGVKGWFKVLSHSSSPEALFSSKRWYLQPSERGAKTFAGTVLLSIRQAKDHSDTVVAWAQGIDDRDAAEALRGARIFVPRSSFPSTTEGEYYWIDLIGLAVVNREGVALGRVQELMSTGPQTVLVLTYEQDGKAQERMIPFVSAFIDNVDLAEKRITVDWQPDY*