ggKbase home page

scnpilot_p_inoc_scaffold_147_138

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(156859..157434)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Acidovorax radicis RepID=UPI0002376319 similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 191.0
  • Bit_score: 371
  • Evalue 4.00e-100
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 379
  • Evalue 2.70e-102
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 191.0
  • Bit_score: 344
  • Evalue 1.90e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCACCCCCCAACCAGACCGTGAACTGATGGAACTCCTTGACCGCATCGCCGCGCAGGAAGACTCTGCGCTCAAAAGGCTGTACGAGCGCACCTCGTCGCCGCTTTTTGGCCTGGCCTTGCGCATTGTGCGCAACCGCGATGTGGCCGAGGACGTGCTGCAGGAGGCCTTCCTGAGCATCTGGCGCGGCGCCGGCAACTACCGCGCATCACTCAGCCCGCCCATGGCGTGGATGGGGCTTATCGTACGCAGCCGGGCGCTGGATGCGCTGCGCAAGCGCAGCAGCGACCGGGCCGACCTGATGAACGAGCTGGACGACGAGCTGGCCCAGACACTGGAGGGCGATTCGCCCAACCCCATGGACACGGCCGATGCCAGCGAGCAGTCGTTTGCGCTGCACCACTGCCTGGGCAAGCTCGACCACAAACAACGCGAGGTGGTCAGCCTGGCCTATCTGCGTGACCAGAGTCACGGCGAACTGGCCGAGCAGCTCAAGTTGCCGCTGGGCACCGTGAAGACCTGGATCCGCCGGGGGCTGGAGCAACTGCGCACCTGCATGGCGCGTTACGCCTGA
PROTEIN sequence
Length: 192
MSTPQPDRELMELLDRIAAQEDSALKRLYERTSSPLFGLALRIVRNRDVAEDVLQEAFLSIWRGAGNYRASLSPPMAWMGLIVRSRALDALRKRSSDRADLMNELDDELAQTLEGDSPNPMDTADASEQSFALHHCLGKLDHKQREVVSLAYLRDQSHGELAEQLKLPLGTVKTWIRRGLEQLRTCMARYA*