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scnpilot_p_inoc_scaffold_170_114

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 131736..133196

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Acidovorax radicis RepID=UPI0002375B67 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 489.0
  • Bit_score: 810
  • Evalue 6.60e-232
  • rbh
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 486.0
  • Bit_score: 923
  • Evalue 1.30e-265
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 493.0
  • Bit_score: 683
  • Evalue 3.40e-194

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGCGTCCAAGAACAAATACATCGTTTTCGCTGTCATCGGCATCGCAGCCGCGTCGGGCGCAGCCTGGTGGCTTCAGAAACCGGCCCAGTCCGTGCGCAGCGAGGCGCCTGCCGACGGCAGGGGTAGCGCCGCGCCGGCTGGTGCGGCGGCCAAGGGTGGGGGCGCAGGCCGCCCCGTGGCGGTAGAGGCCGTGGCCGTGCGGCAGATGGCCTTGCGCGACGATGCCGAGGCCGTGGGCAGTCTGCGGTCGCGCCAGAGCGTGGTGCTGCGCCCCGAGGTGAGCGGTCGCATCACGGCGCTCAACTTTCGCGACGGCGAGCGCGTGCGGCGCGGGCAGGTGCTGGTGCAGTTTGACGACCAGTTGCCCCGCGCCCAGGTGCAGCAGAGCCAGGCCGAGCTCTCCATCGCCCAGGCCAACCACAAACGCAATCAGGAACTGGTGGCCCAGGGCTTCATCAGCCAGCGTTCGGTCGATGAAAGTGCCGCCAACCTCGAAGTGGCGCGGGCCAAATTGTCCTTGGCGCAGGCCACGGCCTCGCGCCTGAAGATCGTGGCGCCGTTTGACGGCATCGCCGGTATTCGCGGGGTGAACGTGGGCGACTACCTCAAGGACGGTGCCGACATCGTCAATGTCGAAGACCTGGATGTGGTGTATGTGGACTTCCGCCTGCCCGAGCGTTTGCAGAGCAAGGTCCGCACGGGCCAGACCGCCCAGGTGGCGTTCGACGCCTTGCCCGGCGTGCGCTACAGCGCCGTGGTGCAGGCCATCAACCCCCAGATTGACGCCGATGGCCGCTCGGTGGTGGTGCGCGGCTGCATTGACAACCGGCGCCTGCAACTGCGCCCCGGCATGTTTGCGCGCGTGACGGCCGTGTTTTCAGAGCGCAGCGATGCCCGGGTGATCCCCGAGGAAGCCATCGTGCCCGACGGCAGCAGCCCGTATGTGTTCAAGATTGTGGATGGCAAGGAGCCTGGCAGCCGCGTGGCGCGGCGCACACCCGTCAAGCTGGGTGCGCGCACCCCCGGGTTTGTGGAAGTGGTGGATGGTCTGGCCATGGGAGATGTGGTGGTGACCGCAGGCCAGCAGCGCATCCAAAAGGATGGCACCCCAGTGCGTGTGGTGGAACTGGGCAAGCCAGGCAAGCAGAGCAATGGCGGTGCGCCATCACCAGCGCGCGCAGCCGCCTCGGCCGGGGCGGCAGGTGCAGACCGTGCTGCAGGTGCCGTGGCACCAACCGATGCACCAGCGCCCACCGGGGCTGGCAGCGCCAGCAGCCCCCGGGCAGCGGCGCAGCCGATGGCAACCGCACCCGTTGCCAATGCTGCTACCGCCGCCGCTGCCACTGCCACTGCAGCATCGGCCAATGCCGTAGTGGCGCCGTTGCCCGGCCCTAATCCTTGCCAGCTTGCGGGCAGGCCCGGCCGCGCACCACAAGGCAGCCCACGCCATCCTGCGTGA
PROTEIN sequence
Length: 487
MASKNKYIVFAVIGIAAASGAAWWLQKPAQSVRSEAPADGRGSAAPAGAAAKGGGAGRPVAVEAVAVRQMALRDDAEAVGSLRSRQSVVLRPEVSGRITALNFRDGERVRRGQVLVQFDDQLPRAQVQQSQAELSIAQANHKRNQELVAQGFISQRSVDESAANLEVARAKLSLAQATASRLKIVAPFDGIAGIRGVNVGDYLKDGADIVNVEDLDVVYVDFRLPERLQSKVRTGQTAQVAFDALPGVRYSAVVQAINPQIDADGRSVVVRGCIDNRRLQLRPGMFARVTAVFSERSDARVIPEEAIVPDGSSPYVFKIVDGKEPGSRVARRTPVKLGARTPGFVEVVDGLAMGDVVVTAGQQRIQKDGTPVRVVELGKPGKQSNGGAPSPARAAASAGAAGADRAAGAVAPTDAPAPTGAGSASSPRAAAQPMATAPVANAATAAAATATAASANAVVAPLPGPNPCQLAGRPGRAPQGSPRHPA*