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scnpilot_p_inoc_scaffold_192_2

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 816..1964

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Acidovorax radicis RepID=UPI00023774A0 similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 265.0
  • Bit_score: 286
  • Evalue 4.40e-74
collagen triple helix repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 389.0
  • Bit_score: 662
  • Evalue 4.20e-187
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 319.0
  • Bit_score: 268
  • Evalue 3.50e-69

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGAAGACCAGATACAAAACTCTCTCCTTGGTGACCGCCCTGGGCGTGGCCTATGCGTACACGCCGCTGGCCCTGGCGGCGGATTTGTCCTTCACGGTACCCAGCGGTGGTGGGTTTGTGGTCAAGAGCCCCGGCGGCCAGGAACGGTTTCGCGTGCAGGACAGTGGCGAGGTGCGCGCACCCGGTCTGAGTGGTGCCACACCCAACACCAGCCTCACGTGCTTTGATAGCGCCACAGGTCGCCTGGGCCCTTGTGCAGCGGGTATTGGATCTGGCGCCACGGGTGCCACAGGCCCTACCGGGCCGACCGGTGCTACAGGCGTGACCGGTGCCACAGGTACTGCTGGTGTTACTGGCGCCACCGGCCCGACAGGTGCCACTGGAGCGACCGGCGCTTCGGGCACCGGTGCCACGGGCGCAACAGGCGCCACCGGGGCCACGGGCGCTACCGGTGTGACGGGCCCCACGGGGGTCACAGGTGCAACGGGCGCCACGGGTGCAGACAGCACCGTTCAAGGACCTACAGGCCCTACGGGGGCTCAAGGCCTCCAGGGCATTCCTGGGCCTACCGGCGCTACCGGTGCCGACAGTACCGTGCCCGGGCCAACCGGGACCACCGGCGCAACGGGTTCTACTGGAGCGACTGGTGCTACTGGTGCTACTGGCGCCACCGGGGCGGCTGGCGGCGGAGGCGGCGGCATCCTGTTCGGCACTGCGGCGATCATGCCAGCGACGACCGACTCGGCCGCTTTTGTGCCTTTTGGCATCGGAGGCATTTCTGGCGGCAATTTTGACTATTCGCGGTGCCTGTTCACTGCAGGGTCGGCCTGCCCCATCGACCCAACGGTGTTCGCCAATGCCTCGTCCCCAGCCTTTGCGACCTGCACCACCACAAAGATGCACGTGAGAAACTACACGGCCGTGCCAACGATTCCCCTGACCGTGACACTCTATAAGAACGGAGCCTCGACGGGTCTGAGTTGCACGGTGGGCGCTACACCTGCAGCCACCTGCACCAGCACCACGGCGGTGGCCCTCTTGCCCACTGACAACATTGCGCTGCATATGAGCACAACCAACGTTGGCGGCTTTACCTCTGGGGGAAGCGCGATCGAAGGAACCGCCATCAGCGCCGTGCATTGCGAGTGA
PROTEIN sequence
Length: 383
MKTRYKTLSLVTALGVAYAYTPLALAADLSFTVPSGGGFVVKSPGGQERFRVQDSGEVRAPGLSGATPNTSLTCFDSATGRLGPCAAGIGSGATGATGPTGPTGATGVTGATGTAGVTGATGPTGATGATGASGTGATGATGATGATGATGVTGPTGVTGATGATGADSTVQGPTGPTGAQGLQGIPGPTGATGADSTVPGPTGTTGATGSTGATGATGATGATGAAGGGGGGILFGTAAIMPATTDSAAFVPFGIGGISGGNFDYSRCLFTAGSACPIDPTVFANASSPAFATCTTTKMHVRNYTAVPTIPLTVTLYKNGASTGLSCTVGATPAATCTSTTAVALLPTDNIALHMSTTNVGGFTSGGSAIEGTAISAVHCE*