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scnpilot_p_inoc_scaffold_269_38

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(35246..35806)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Acidovorax radicis RepID=UPI0002377509 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 186.0
  • Bit_score: 368
  • Evalue 5.70e-99
  • rbh
rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 186.0
  • Bit_score: 373
  • Evalue 1.90e-100
rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 186.0
  • Bit_score: 258
  • Evalue 1.40e-66

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAGCCGCCTGGCCCTGGCGCCACTGCCGCTGGCGGGGCTCTTCCGTGTGGTGCGTCAGCCACTGGTGGATGAACGCGGTTTTTTTTCACGCCTGTTTTGCGCCGACGAACTGGCAGGCGCAGGCTGGACAACCCCCATCACCCAGATCAACCACAGCTACACAGCCCTCCAAGGCACTGTGCGTGGCATGCACTACCAAAAGCCGCCCCACGCCGAGATGAAACTGGTGACCTGCCTGCGCGGCGAGGTCTGGGACGTGGCCGTGGACCTGCGCCAGGGCTCGCCCACCTTTTTGCAATGGCACGCCGAACATTTGTCCGCAGACAACGGCAATGCGCTACTCATTCCGCCCGGTTTTGCCCACGGCTTCCAGGCGCTGAGCGACCATGCAGAGCTGTTGTATTGCCACTCTGCGGCCTATGCGCCTGCCGCCGAAGCGGGCCTGAACCCGCTGGACCCGCGCCTGGCCATTGCCTGGCCGCTGCCGGTGGGGAAAATGTCGCCCCGCGACGCAGGCCAGCCCGGGATGACCGAAGAATTCGAAGGAGTGCGCCTGTGA
PROTEIN sequence
Length: 187
MSRLALAPLPLAGLFRVVRQPLVDERGFFSRLFCADELAGAGWTTPITQINHSYTALQGTVRGMHYQKPPHAEMKLVTCLRGEVWDVAVDLRQGSPTFLQWHAEHLSADNGNALLIPPGFAHGFQALSDHAELLYCHSAAYAPAAEAGLNPLDPRLAIAWPLPVGKMSPRDAGQPGMTEEFEGVRL*