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scnpilot_p_inoc_scaffold_352_26

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 26974..29115

Top 3 Functional Annotations

Value Algorithm Source
secretin n=1 Tax=Acidovorax radicis RepID=UPI00023782E4 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 713.0
  • Bit_score: 1291
  • Evalue 0.0
  • rbh
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 713.0
  • Bit_score: 1344
  • Evalue 0.0
type IV pilus secretin PilQ similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 707.0
  • Bit_score: 1011
  • Evalue 1.40e-292

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2142
ATGAAATATCTGAAAATTTATCCATCAAAAATTTGTCAAATTGCAGTGGGAGTCACATTTGCTGTATTGACGCCCATTAGCGTGTTCGCACAGGTCGTGGTTCAATCTGTAGTGGGGAGTGTGCAGAACGGTGTAGATGTGGTTCGTATCGATTTTTCTGAACCACTGAAATCCGTGCCCACAGGATTTTCCATCCAATCGCCTCCTCGCATTGCTTTGGACTTTCCTGATGCATCCAATGCAACCGGAAAAAATGTATTTGAAGTGAATCAGGGCAATGTCAAGTCGGTTAATGTGGTGCAGGCCGGTGACCGTTCCCGAATTGTCCTGAATCTTAAGCAATCCACTTCCTATCAGGCCGATATTCAAGGGAAATCACTGCTGATTTCTTTGGGCGCGGTGCAATCTGCCAATTCAGCAACTCAAGCGGTGTCTGCTCCAGTTTTTGCTGATCCTGCTAGTTCTGAGGTTCAGACGCTGAAAGATGTTGACTTCAGACGAGGCGCGGATGGCTCTGGGCGTGTGGTGGTGATGTTGCCCTCAAGCCAAGTGGGCGTTGATATTCGTCAGCAGGGAAAAGGTTTGGTGGTGGACTTCCTAAAATCTTCATTGCCGGAAGGACTGCGTCGGCGTTTGGATGTGGGTGATTTTGGCACGCCAGTACAAGCTATTACCACCGTCCAGCAAGGTGAGCGGGTTCGCATGACCATCGATCCTGTTGGTGAATGGGAGCATAGCGCGTATCAAAGTGATAGCCAATTTGTGGTTGAAATCCGGCAGAAGAAGGTCGATCTGAATAAGTTAACGCAAGGCCCTGGATATAGCGGGGAGAAGCTATCGCTGAATTTTCAGAATATTGAAGTTCGATCACTTCTGCAAGTGATTGCTGATTTCACCAATTTCAATATTGTTACCTCGGATACAGTCACTGGTTCGCTGACATTGCGTCTCAAAGATGTGCCTTGGGATCAAGCACTTCAAATCATAATGGAGGCTAAAGGCCTGGGGATGCGGAAATCTGGCACTGTGTTGTGGATTGCGCCTAAAGATGAAATTGATGACAGAACGAGGAAAGACTACGAGGCCGCGTTAGCTATTCAAAAACTGGAGCCACTCCGAACCCAAGCGTTCCAGATGAATTATGCAAAAGCAGTTGATATGGTCGCTCAATTGACCGCCTCAAGTAGCGGTACCTCTGGGGGAACCTCAAATAGATTCCTGTCGGAGCGAGGAAGTGCTATTGCGGAACCCAGAACCAATCAGCTTTTTGTGACTGACACGGCAAGTAAATTGGAAGAAGTGCGTCAGTTGCTCTCGACTCTGGATGTCGCTGTTCGGCAAGTGATGATTGAAGCGAGAATTGTTGAGGCATCCGATACGTTCGGGCGCTCTTTGGGCGTTCGGTTGGGTGGGACAGACTTGCGTGCTAATCGTGGCGGTACCGGGGGGTACAACATCGGTGGCGGCAACAGCATGGCGTTTGGTACTAGTTATAGCAATGCAGTAGCTTCGTCTGGTGCTGGTGGAGCTACTAATACGCTGGGTAATTTTGTTAATCTTCCTGCGCAAGCCCAAGGTGGGTTCGATCCGGCTAGCTTCGCTATATCGATTTTCAACTCGGCAGCCAACAGATTTTTGAATCTAGAGATATCTGCGATGGAAGCAGACGGCAAAGGTAAGATTGTTTCTAGTCCCCGTGTTGTGACAGCTGATCAAACCAAAGCGTCCATAGAGCAGGGTACCGAATTTCCATATCCTGTAACCGCGCCTAATGGTGGAACGGTTATCGCGTTTAAGAAGGCTGTTTTGAAGCTGGAGGTTCTGCCTCAAATTACTCCAGAGGGTAATATCATCTTGGACCTTGATGTGAATAAAGATAGCCCAGGTGAGATTCTTCAAAATGTTCGGGCAATCAATACTAAGCACATTAAAACTCAAGTGTTGGTTGAAAATGGTGGTACCGTTGTGATTGGTGGTATCTTTGAGCTTTTCGAGGACGACGCTGAGGCTAAGGTGCCGTTTTTGGGTGATATTCCAGGGGTTGGTAATTTGTTTAAAACAAAAACTAAACAAGCCAATAAACAAGAGATGTTGATTTTTATCACTCCAAAGGTTCTCACTGAGCGTGCTGCAGCTCGATAA
PROTEIN sequence
Length: 714
MKYLKIYPSKICQIAVGVTFAVLTPISVFAQVVVQSVVGSVQNGVDVVRIDFSEPLKSVPTGFSIQSPPRIALDFPDASNATGKNVFEVNQGNVKSVNVVQAGDRSRIVLNLKQSTSYQADIQGKSLLISLGAVQSANSATQAVSAPVFADPASSEVQTLKDVDFRRGADGSGRVVVMLPSSQVGVDIRQQGKGLVVDFLKSSLPEGLRRRLDVGDFGTPVQAITTVQQGERVRMTIDPVGEWEHSAYQSDSQFVVEIRQKKVDLNKLTQGPGYSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGSLTLRLKDVPWDQALQIIMEAKGLGMRKSGTVLWIAPKDEIDDRTRKDYEAALAIQKLEPLRTQAFQMNYAKAVDMVAQLTASSSGTSGGTSNRFLSERGSAIAEPRTNQLFVTDTASKLEEVRQLLSTLDVAVRQVMIEARIVEASDTFGRSLGVRLGGTDLRANRGGTGGYNIGGGNSMAFGTSYSNAVASSGAGGATNTLGNFVNLPAQAQGGFDPASFAISIFNSAANRFLNLEISAMEADGKGKIVSSPRVVTADQTKASIEQGTEFPYPVTAPNGGTVIAFKKAVLKLEVLPQITPEGNIILDLDVNKDSPGEILQNVRAINTKHIKTQVLVENGGTVVIGGIFELFEDDAEAKVPFLGDIPGVGNLFKTKTKQANKQEMLIFITPKVLTERAAAR*